Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_04403 and BSU30240

See Amino acid alignment / Visit BSNT_04403 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence dna-align/BSNT_04403.1.22522.seq
#    -bsequence dna-align/BSU30240___bioW.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04403-BSU30240___bioW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04403-BSU30240___bioW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04403
# 2: BSU30240___bioW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 777
# Identity:     624/777 (80.3%)
# Similarity:   624/777 (80.3%)
# Gaps:         144/777 (18.5%)
# Score: 3084.0
# 
#
#=======================================

BSNT_04403         1 ------------------------------------------ATGAATGG      8
                                                               ||||||||
BSU30240___bi      1 ATGCAAGAAGAAACTTTTTATAGTGTCAGAATGAGGGCTTCAATGAATGG     50

BSNT_04403         9 GTCTCATGAAGACGGCGGAAAGCATATATCCGGCGGAGAACGGCTTATTC     58
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU30240___bi     51 ATCTCATGAAGACGGCGGAAAGCATATATCCGGCGGAGAACGGCTTATTC    100

BSNT_04403        59 CTTTCCATGAGATGAAGCATACAGTCAATGCTTTATTAGAAAAAGGGTTA    108
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30240___bi    101 CTTTCCATGAGATGAAGCATACAGTCAATGCTTTATTAGAAAAAGGGTTA    150

BSNT_04403       109 TCCCATTCAAGAGGAAAACCTGATTTTATGCAAATTCAATTTGAAGAGGT    158
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30240___bi    151 TCCCATTCAAGAGGAAAACCTGATTTTATGCAAATTCAATTTGAAGAGGT    200

BSNT_04403       159 ACATGAATCGATAAAAACCATTCAGCCATTGCCTGTGTATACGAATGAAG    208
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU30240___bi    201 ACATGAATCGATAAAAACCATTCAGCCATTGCCTGTGCATACGAATGAAG    250

BSNT_04403       209 TGAGCTGCCCGGGAGAAGGACAAAAGCTTGCCCGATTGTTATTGGAAAAA    258
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU30240___bi    251 TGAGCTGCCCGGAAGAAGGACAAAAGCTTGCCCGATTGTTATTGGAAAAA    300

BSNT_04403       259 GAAGGCGTTTCACGAGACGTGATTGAAAAAGCGTATGAACAAATCCCAGA    308
                     ||||||||||||||||||||||||||||||||.||||||||||||||.||
BSU30240___bi    301 GAAGGCGTTTCACGAGACGTGATTGAAAAAGCATATGAACAAATCCCTGA    350

BSNT_04403       309 ATGGTCAGATGTCAGGGGTGCGGTGTTGTTTGATATTCATACAGGCAAGC    358
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30240___bi    351 ATGGTCAGATGTCAGGGGTGCGGTGTTGTTTGATATTCATACAGGCAAGC    400

BSNT_04403       359 GAATGGATCAAACAAAAGAAAAAGGGGTGCGGGTCTCCAGAATGGATTGG    408
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30240___bi    401 GAATGGATCAAACAAAAGAAAAAGGGGTGCGGGTCTCCAGAATGGATTGG    450

BSNT_04403       409 CCGGACGCTAATTTTGAAAAATGGGCGCTTCACAGTCACGTGCCGGCTCA    458
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU30240___bi    451 CCGGACGCTAATTTTGAAAAATGGGCGCTTCACAGTCACGTGCCAGCTCA    500

BSNT_04403       459 TTCAAGAATAAAAGAGGCCCTTGCGCTCGCTTCAAAGGTAAGCCGGCACC    508
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30240___bi    501 TTCAAGAATAAAAGAGGCCCTTGCGCTCGCTTCAAAGGTAAGCCGGCACC    550

BSNT_04403       509 CGGCAGCCATTGCAGAATTATGCTGGTCGGACGATCCGGATTACATAACA    558
                     ||||||.|.|||||||||||||||||||||||||||||||||||||||||
BSU30240___bi    551 CGGCAGTCGTTGCAGAATTATGCTGGTCGGACGATCCGGATTACATAACA    600

BSNT_04403       559 GGCTATGTTGCGGGTAAGAAAATGGGCTATCAGCGTATTACAGCAATGAA    608
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30240___bi    601 GGCTATGTTGCGGGTAAGAAAATGGGCTATCAGCGTATTACAGCAATGAA    650

BSNT_04403       609 AGAATACGGGACTGAAGAGGGCTGA-------------------------    633
                     ||||||||||||||||||||||||.                         
BSU30240___bi    651 AGAATACGGGACTGAAGAGGGCTGCCGAGTCTTTTTTATTGATGGATCCA    700

BSNT_04403       633 --------------------------------------------------    633
                                                                       
BSU30240___bi    701 ATGATGTAAACACGTACATACATGACCTGGAGAAGCAGCCTATTTTAATA    750

BSNT_04403       633 ---------------------------    633
                                                
BSU30240___bi    751 GAGTGGGAGGAAGATCATGACTCATGA    777


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.