Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_04442 and BSU30500

See Amino acid alignment / Visit BSNT_04442 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:11
# Commandline: needle
#    -asequence dna-align/BSNT_04442___ytpB.1.22522.seq
#    -bsequence dna-align/BSU30500___ytpB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04442___ytpB-BSU30500___ytpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04442___ytpB-BSU30500___ytpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04442___ytpB
# 2: BSU30500___ytpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1107
# Identity:    1087/1107 (98.2%)
# Similarity:  1087/1107 (98.2%)
# Gaps:           3/1107 ( 0.3%)
# Score: 5367.0
# 
#
#=======================================

BSNT_04442___      1 GTGTTGACAGTACCGGAACATCCTTTTGGATTGATGGCAAAGGTATATCG     50
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt      1 ---TTGACAGTACCGGAACATCCTTTTGGATTGATGGCAAAGGTATATCG     47

BSNT_04442___     51 AGATATTTTTCCGCTCGTTCATCAAGAGCTGGACATATGGAAGCAAAAAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt     48 AGATATTTTTCCGCTCGTTCATCAAGAGCTGGACATATGGAAGCAAAAAT     97

BSNT_04442___    101 CAGAATCGATTCATAACAGTGAATTGAAAGCACAGGCAACCGCAAGTATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt     98 CAGAATCGATTCATAACAGTGAATTGAAAGCACAGGCAACCGCAAGTATT    147

BSNT_04442___    151 CGGGACAAAACGTTTCACTGTGAAGGCGGCGGCATACTGGCCTTATTGTC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt    148 CGGGACAAAACGTTTCACTGTGAAGGCGGCGGCATACTGGCCTTATTGTC    197

BSNT_04442___    201 AGGCAGCCAAAAACAGAAATGTGTCGAGTTTATCATCGCGTATCAAACGA    250
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU30500___yt    198 AGGCAGCCAAAAGCAGAAATGTGTCGAGTTTATCATCGCGTATCAAACGA    247

BSNT_04442___    251 TTAGTGATTATTTGGACAATCTGTGTGACCGCAGCACCTCGCTGGACCCG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt    248 TTAGTGATTATTTGGACAATCTGTGTGACCGCAGCACCTCGCTGGACCCG    297

BSNT_04442___    301 CAGGATTTTCGGATGCTCCATGCCTCAATGCAGGATGCACTGACAGTTGG    350
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU30500___yt    298 CAGGATTTTCGGATGCTCCATGCCTCAATGCAGGACGCACTGACAGTTGG    347

BSNT_04442___    351 GGCGGAACTGCAAAACTATTATCAATTCAGGGAAGAACAGGATGACAGCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt    348 GGCGGAACTGCAAAACTATTATCAATTCAGGGAAGAACAGGATGACAGCG    397

BSNT_04442___    401 GATATCTGCACGAACTGGTCAAAACGTGCCAGCGTGTCCTTGGTTCCATT    450
                     |||||.||||.||||||||.|||||||||||||||||.||.||.||||||
BSU30500___yt    398 GATATTTGCATGAACTGGTTAAAACGTGCCAGCGTGTTCTCGGCTCCATT    447

BSNT_04442___    451 GAGCACTATGACATGATTAAACCTTATCTGCTTGAACTGTGCGGCTATTA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt    448 GAGCACTATGACATGATTAAACCTTATCTGCTTGAACTGTGCGGCTATTA    497

BSNT_04442___    501 TTGCGATTTGCAGGTGCATAAGCACGTTATTGAGCATGAGCGTGTTCCGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt    498 TTGCGATTTGCAGGTGCATAAGCACGTTATTGAGCATGAGCGTGTTCCGC    547

BSNT_04442___    551 GGCTTGAAAAGTGGTTTACTCAATATGAATCAGAGCTGCCTGAGATGGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt    548 GGCTTGAAAAGTGGTTTACTCAATATGAATCAGAGCTGCCTGAGATGGAA    597

BSNT_04442___    601 TGGTATGAATTTTCAGCCTGTGCAGGCTCAACGTTAGGCATTTTCTGTCT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt    598 TGGTATGAATTTTCAGCCTGTGCAGGCTCAACGTTAGGCATTTTCTGTCT    647

BSNT_04442___    651 GGTTGCGTATTCGTTCCAGCCTGATTTCACAGAAAGCACCGCTAAAAAAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt    648 GGTTGCGTATTCGTTCCAGCCTGATTTCACAGAAAGCACCGCTAAAAAAA    697

BSNT_04442___    701 TCCGCGACAGTTATTTTCCTTACATACAGGGCCTTCATATCCTGCTTGAT    750
                     ||||.||||||||||||||||||||||||||.||||||||.||.||||||
BSU30500___yt    698 TCCGAGACAGTTATTTTCCTTACATACAGGGTCTTCATATTCTTCTTGAT    747

BSNT_04442___    751 TATTTGATTGATCAAGAGGAGGACTTGCTGGAAGGAGACTTGAATTTCTG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt    748 TATTTGATTGATCAAGAGGAGGACTTGCTGGAAGGAGACTTGAATTTCTG    797

BSNT_04442___    801 CTCATATTATCAGTCTCATGAAGAGATGATGAATCGGCTTGAACACTTTA    850
                     |||.|||||||||||||||||||||||||||.|.||||||||||||||||
BSU30500___yt    798 CTCGTATTATCAGTCTCATGAAGAGATGATGGACCGGCTTGAACACTTTA    847

BSNT_04442___    851 TCCATAAAGCCGACGAGCATTTACAAGGCATTCCGCATGAAAACTTCCAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt    848 TCCATAAAGCCGACGAGCATTTACAAGGCATTCCGCATGAAAACTTCCAT    897

BSNT_04442___    901 CGTTTAATCAATCGCGGCTTGCTTGGTGTTTATTTGTCAGATGATAAAGT    950
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU30500___yt    898 CGTTTAATCAATCGCGGCTTGCTTGGCGTTTATTTGTCAGATGATAAAGT    947

BSNT_04442___    951 GGCAGGCCAAAAGGAAATGGGCCGGCTCGCAAAGAAGCTGATCAAAGCCA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt    948 GGCAGGCCAAAAGGAAATGGGCCGGCTCGCAAAGAAGCTGATCAAAGCCA    997

BSNT_04442___   1001 GCGGAAAAACCTCCCTTTTCTTTTATATCAACGGCAGAGCCTACCGGAAA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt    998 GCGGAAAAACCTCCCTTTTCTTTTATATCAACGGCAGAGCCTACCGGAAA   1047

BSNT_04442___   1051 TTTCAAAAAATGTCCTGGATGAAAAACTCAAAGAAAAAAGCTCAAATCAT   1100
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU30500___yt   1048 TTTCAAAAAATGTCCTGGATGAAAAATTCAAAGAAAAAAGCTCAAATCAT   1097

BSNT_04442___   1101 TTGCTGA   1107
                     |||||||
BSU30500___yt   1098 TTGCTGA   1104


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.