Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04485 and BSU30820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence dna-align/BSNT_04485___menD.1.22522.seq
# -bsequence dna-align/BSU30820___menD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04485___menD-BSU30820___menD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04485___menD-BSU30820___menD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04485___menD
# 2: BSU30820___menD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1743
# Identity: 1719/1743 (98.6%)
# Similarity: 1719/1743 (98.6%)
# Gaps: 3/1743 ( 0.2%)
# Score: 8500.0
#
#
#=======================================
BSNT_04485___ 1 TTGACAGTCAACCCGATTACTCATTACATCGGAAGTTTTATTGATGAATT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 1 TTGACAGTCAACCCGATTACTCATTACATCGGAAGTTTTATTGATGAATT 50
BSNT_04485___ 51 CGCCCTTTCCGGAATTACGGACGCCGTCGTTTGTCCGGGCTCAAGATCTA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 51 CGCCCTTTCCGGAATTACGGACGCCGTCGTTTGTCCGGGCTCAAGATCTA 100
BSNT_04485___ 101 CACCGCTGGCTGTTCTTTGTGCTGCGCATCCCGATATCAGCGTCCATGTC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 101 CACCGCTGGCTGTTCTTTGTGCTGCGCATCCCGATATCAGCGTCCATGTC 150
BSNT_04485___ 151 CAAATTGATGAAAGATCTGCCGGGTTTTTTGCCTTAGGTTTGGCAAAAGC 200
||||||||||||||.||||||||.||||||||.|||||||||||||||||
BSU30820___me 151 CAAATTGATGAAAGGTCTGCCGGATTTTTTGCATTAGGTTTGGCAAAAGC 200
BSNT_04485___ 201 GAAGCAGCGTCCCGTACTATTGATCTGTACATCTGGAACAGCCGCGGCTA 250
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU30820___me 201 GAAGCAGCGTCCCGTACTATTGATCTGTACATCTGGAACAGCCGCGGCCA 250
BSNT_04485___ 251 ACTTTTATCCGGCTGTGGTTGAAGCCCATTATTCAAGGGTGCCTATTATT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 251 ACTTTTATCCGGCTGTGGTTGAAGCCCATTATTCAAGGGTGCCTATTATT 300
BSNT_04485___ 301 GTGTTAACTGCTGATCGGCCTCATGAGCTGCGCGAAGTAGGCGCACCGCA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 301 GTGTTAACTGCTGATCGGCCTCATGAGCTGCGCGAAGTAGGCGCACCGCA 350
BSNT_04485___ 351 GGCTATTAATCAGCACTTCTTATTCGGTAACTTTGTTAAGTTTTTCACAG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 351 GGCTATTAATCAGCACTTCTTATTCGGTAACTTTGTTAAGTTTTTCACAG 400
BSNT_04485___ 401 ACTCTGCTCTTCCTGAAGAGTCTCCGCAAATGCTGAGATACATCCGAACG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 401 ACTCTGCTCTTCCTGAAGAGTCTCCGCAAATGCTGAGATACATCCGAACG 450
BSNT_04485___ 451 CTGGCAAGCCGCGCTGCCGGAGAAGCACAAAAGCGCCCAATGGGGCCTGT 500
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU30820___me 451 CTGGCAAGCCGCGCTGCCGGAGAAGCACAAAAGCGCCCGATGGGGCCTGT 500
BSNT_04485___ 501 CCATGTGAATGTGCCGCTGCGCGAACCGCTGATGCCGGATCTTTCAGATG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 501 CCATGTGAATGTGCCGCTGCGCGAACCGCTGATGCCGGATCTTTCAGATG 550
BSNT_04485___ 551 AGCCGTTTGGAAGAATGAGAACAGGCCGTCATGTATCTGTGAAAACGGGT 600
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU30820___me 551 AGCCGTTTGGAAGAATGAGAACAGGCCGTCATGTGTCTGTGAAAACGGGT 600
BSNT_04485___ 601 ACGCAGTCTGTTGACCGCGAGTCCCTGTCTGATGTGGCTGAGATGCTCGC 650
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU30820___me 601 ACGCAGTCTGTTGACCGAGAGTCCCTGTCTGATGTGGCTGAGATGCTCGC 650
BSNT_04485___ 651 AGAGGCTGAAAAAGGAATGATCGTCTGCGGAGAGCTCCATAGTGATGTGG 700
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU30820___me 651 AGAGGCTGAAAAAGGAATGATCGTCTGCGGAGAGCTCCATAGTGATGCGG 700
BSNT_04485___ 701 ATAAGGAAAACATTATTACGCTGTCAAAAGCGCTTCAGTATCCAATTTTA 750
|.|||||||||||||||.||||||||||||||||||||||||||||||||
BSU30820___me 701 ACAAGGAAAACATTATTGCGCTGTCAAAAGCGCTTCAGTATCCAATTTTA 750
BSNT_04485___ 751 GCGGATCCGCTGTCTAATCTGCGGAATGGTGTTCATGATAAAAGCACTGT 800
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 751 GCAGATCCGCTGTCTAATCTGCGGAATGGTGTTCATGATAAAAGCACTGT 800
BSNT_04485___ 801 TATTGATGCGTATGATTCGTTTTTAAAAGATGATAAGCTGAAGCGGAAAC 850
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU30820___me 801 TATTGATGCGTATGATTCGTTTTTAAAAGATGATGAGCTGAAGCGGAAAC 850
BSNT_04485___ 851 TTCGTCCTGATGTTGTCATTCGGTTTGGACCGATGCCTGTTTCAAAACCG 900
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 851 TCCGTCCTGATGTTGTCATTCGGTTTGGACCGATGCCTGTTTCAAAACCG 900
BSNT_04485___ 901 GTTTTCTTATGGCTTAAGGATGATCCGGCGATTCAGCAAATCGTGATTGA 950
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU30820___me 901 GTTTTCTTATGGCTTAAGGATGATCCGACGATTCAGCAAATCGTGATTGA 950
BSNT_04485___ 951 CGAGGATGGAGGCTGGAGAGATCCGACGCAGGTAAGCGCGCATATGATTC 1000
||||||||||||.||||||||.|||||.||||.|||||||||||||||||
BSU30820___me 951 CGAGGATGGAGGGTGGAGAGACCCGACACAGGCAAGCGCGCATATGATTC 1000
BSNT_04485___ 1001 ATTGTAATGCGTCTGTTTTTGCTGAGGAGATCATGGCAGGCCTTACTGCT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 1001 ATTGTAATGCGTCTGTTTTTGCTGAGGAGATCATGGCAGGCCTTACTGCT 1050
BSNT_04485___ 1051 G---CCAGATCCTCAGAGTGGCTGGAAAAGTGGCAGTTTGTCAATGGGCG 1097
| ||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 1051 GCCACCAGATCCTCAGAGTGGCTGGAAAAGTGGCAGTTTGTCAATGGGCG 1100
BSNT_04485___ 1098 GTTCCGCGAGCATCTGCAAACAATCAGCAGTGAAGATGTTTCGTTTGAAG 1147
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 1101 GTTCCGCGAGCATCTGCAAACAATCAGCAGTGAAGATGTTTCGTTTGAAG 1150
BSNT_04485___ 1148 GCAATCTCTATCGAATCCTTCAGCATCTTGTGCCTGAAAACAGCTCGCTG 1197
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 1151 GCAATCTCTATCGAATCCTTCAGCATCTTGTGCCTGAAAACAGCTCGCTG 1200
BSNT_04485___ 1198 TTTGTGGGAAACAGCATGCCGATCAGGGATGTTGATACGTTTTTTGAAAA 1247
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 1201 TTTGTGGGAAACAGCATGCCGATCAGGGATGTTGATACGTTTTTTGAAAA 1250
BSNT_04485___ 1248 GCAGGACCGCCCTTTCCGGATTTATTCAAACCGGGGAGCAAACGGGATAG 1297
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 1251 GCAGGACCGCCCTTTCCGGATTTATTCAAACCGGGGAGCAAACGGGATAG 1300
BSNT_04485___ 1298 ACGGTGTCGTCTCCTCTGCCATGGGGGTATGTGAAGGAACAAAAGCGCCT 1347
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 1301 ACGGTGTCGTCTCCTCTGCCATGGGGGTATGTGAAGGAACAAAAGCGCCT 1350
BSNT_04485___ 1348 GTTACCCTTGTGATTGGAGATTTATCTTTTTATCACGATTTAAACGGCCT 1397
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU30820___me 1351 GTTACCCTTGTGATTGGAGATTTATCTTTTTATCATGATTTAAACGGCCT 1400
BSNT_04485___ 1398 GCTGGCGGCCAAAAAGCTGGGTATTCCTCTTACTGTGATTCTTGTCAATA 1447
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 1401 GCTGGCGGCCAAAAAGCTGGGTATTCCTCTTACTGTGATTCTTGTCAATA 1450
BSNT_04485___ 1448 ATGACGGAGGAGGGATTTTCTCCTTTTTGCCGCAGGCTTCTGAAAAGACA 1497
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU30820___me 1451 ATGACGGAGGAGGGATTTTCTCCTTTTTGCCGCAGGCTTCTGAGAAGACA 1500
BSNT_04485___ 1498 CACTTTGAAGATTTGTTCGGCACACCGACAGGGCTCGATTTCAAGCATGC 1547
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 1501 CACTTTGAAGATTTGTTCGGCACACCGACAGGGCTCGATTTCAAGCATGC 1550
BSNT_04485___ 1548 CGCTGCACTTTACGGCGGAACGTATTCATGCCCGGCTTCTTGGGATGAAT 1597
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 1551 GGCTGCACTTTACGGCGGAACGTATTCATGCCCGGCTTCTTGGGATGAAT 1600
BSNT_04485___ 1598 TCAAAACAGCTTACGCGCCGCAGGCAGACAAGCCCGGACTCCATTTGATT 1647
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 1601 TCAAAACAGCTTACGCGCCGCAGGCAGACAAGCCCGGACTCCATTTGATT 1650
BSNT_04485___ 1648 GAAATCAAAACGGATCGCCAATCAAGAGTCCAGCTTCATCGCGATATGCT 1697
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 1651 GAAATCAAAACGGATCGCCAATCAAGAGTCCAGCTTCATCGCGATATGCT 1700
BSNT_04485___ 1698 GAATGAGGCTGTGCGGGAAGTGAAAAAACAATGGGAACTGTAA 1740
|||||||||||||||||||||||||||||||||||||||||||
BSU30820___me 1701 GAATGAGGCTGTGCGGGAAGTGAAAAAACAATGGGAACTGTAA 1743
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