Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04497 and BSU30920

See Amino acid alignment / Visit BSNT_04497 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:18
# Commandline: needle
#    -asequence dna-align/BSNT_04497___ytaA.1.22522.seq
#    -bsequence dna-align/BSU30920___cotI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04497___ytaA-BSU30920___cotI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04497___ytaA-BSU30920___cotI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04497___ytaA
# 2: BSU30920___cotI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1074
# Identity:    1046/1074 (97.4%)
# Similarity:  1046/1074 (97.4%)
# Gaps:          12/1074 ( 1.1%)
# Score: 5166.0
# 
#
#=======================================

BSNT_04497___      1 ------------ATGGCAGAAAACCATGAAGTCATTGAGGAGGGGAATTC     38
                                 ||||||||||||||||||||||||||||||||||||||
BSU30920___co      1 ATGTGTCCTTTAATGGCAGAAAACCATGAAGTCATTGAGGAGGGGAATTC     50

BSNT_04497___     39 ATCAGAGCTTCCTTTATCAGCAGAAGATGCAAAAAAATTAACGGAGCTGG     88
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30920___co     51 ATCAGAGCTTCCTTTATCAGCAGAAGATGCAAAAAAATTAACGGAGCTGG    100

BSNT_04497___     89 CTGAAAATGTGCTTCAAGGATGGGATGTGCAGGCTGAAAAAATAGACGTC    138
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30920___co    101 CTGAAAATGTGCTTCAAGGATGGGATGTGCAGGCTGAAAAAATAGACGTC    150

BSNT_04497___    139 ATTCAGGGAAATCAGATGGCGCTTGTCTGGAAGGTCCACACAGACTCCGG    188
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU30920___co    151 ATTCAGGGAAACCAGATGGCGCTTGTCTGGAAGGTCCACACAGACTCCGG    200

BSNT_04497___    189 CGCGCTTTGTCTAAAACGAATACACAGGCCAGAAAAGAAAGCGTTGTTTT    238
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU30920___co    201 CGCGGTTTGTCTAAAACGAATACACAGGCCAGAAAAGAAAGCGTTGTTTT    250

BSNT_04497___    239 CCATTTTCGCGCAGGACTATTTAGCAAAAAAAGGCATGAATGTTCCTGGC    288
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30920___co    251 CCATTTTCGCGCAGGACTATTTAGCAAAAAAAGGCATGAATGTTCCTGGC    300

BSNT_04497___    289 ATACTCCCAAACAAAAAAGGCAGCCTATATTCCAAGCACGGCTCATTTCT    338
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU30920___co    301 ATACTCCCAAACAAAAAAGGCAGCCTATATTCTAAGCACGGCTCATTTCT    350

BSNT_04497___    339 ATTTGTCGTATATGACTGGATCGAAGGAAGGCCGTTTGAGCTGACTGTAA    388
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU30920___co    351 ATTTGTCGTATATGACTGGATCGAAGGAAGACCGTTTGAGCTGACTGTAA    400

BSNT_04497___    389 AGCAGGACTTGGAGTTTATCATGAAAGGCCTTGCTGATTTTCATACAGCT    438
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30920___co    401 AGCAGGACTTGGAGTTTATCATGAAAGGCCTTGCTGATTTTCATACAGCT    450

BSNT_04497___    439 TCCGTCGGATATCAGCCGCCAAATGGCGTTCCCGTATTTACCAAATTAGG    488
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU30920___co    451 TCCGTCGGATATCAGCCGCCAAATGGCGTTCCCATATTTACCAAATTAGG    500

BSNT_04497___    489 TCGCTGGCCGAATCACTACACGAAACGATGCAAACAGATGGAAACGTGGA    538
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30920___co    501 TCGCTGGCCGAATCACTACACGAAACGATGCAAACAGATGGAAACGTGGA    550

BSNT_04497___    539 AGCTGATGGCGGAGGCGGAAAAAGAAGATCCTTTCTCACAGTTTTATCTT    588
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU30920___co    551 AGCTGATGGCGGAGGCGGAAAAAGAAGATCCTTTCTCACAGCTTTATCTT    600

BSNT_04497___    589 CAGGAGATAGATGGCTTTATTGAAGACGGGCTGCGCATCAAAGACCGGCT    638
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30920___co    601 CAGGAGATAGATGGCTTTATTGAAGACGGGCTGCGCATCAAAGACCGGCT    650

BSNT_04497___    639 TTTGCAGTCGACCTATGTTCCATGGACTGAACAGCTGAAAAAAAGCCCTA    688
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU30920___co    651 TTTGCAATCGACCTATGTTCCATGGACTGAACAGCTGAAAAAAAGCCCTA    700

BSNT_04497___    689 ACCTTTGCCACCAGGATTACGGAACCGGAAATACACTCTTAGGGGAAAAT    738
                     ||||||||||||||||||||||||||||.||||||||||||||.||||||
BSU30920___co    701 ACCTTTGCCACCAGGATTACGGAACCGGGAATACACTCTTAGGAGAAAAT    750

BSNT_04497___    739 GAACAGATTTGGGTCATTGACTTAGATACCGTTTCATTCGATCTGCCTAT    788
                     |||||||||||||||||.||||||||||||||.|||||.|||||||||||
BSU30920___co    751 GAACAGATTTGGGTCATCGACTTAGATACCGTATCATTTGATCTGCCTAT    800

BSNT_04497___    789 TCGCGATTTGCGCAAAATGATTATTCCGCTTTTGGATACGACGGGCGTTT    838
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU30920___co    801 TCGCGATTTGCGCAAAATGATTATTCCGCTTTTGGATACGACGGGTGTTT    850

BSNT_04497___    839 GGGATGAAGAAACATTTCATGTCATGCTGAACGCATACGAATCCAGAGCC    888
                     |||||||.|||||||||.||||||||||||||||||||||||||||||||
BSU30920___co    851 GGGATGACGAAACATTTAATGTCATGCTGAACGCATACGAATCCAGAGCC    900

BSNT_04497___    889 CCATTAACTGAAGAACAAAAACAAGTCATGTTTATTGATATGCTGTTTCC    938
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30920___co    901 CCATTAACTGAAGAACAAAAACAAGTCATGTTTATTGATATGCTGTTTCC    950

BSNT_04497___    939 TTACGAGCTTTACGATGTCATTCGCGAAAAATACGTCCGCAAGTCGGCTT    988
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU30920___co    951 TTACGAGCTTTACGATGTCATTCGCGAAAAATACGTCCGCAAGTCTGCTT   1000

BSNT_04497___    989 TACCGAAGGAAGAATTAGAATCAGCTTTTGAATATGAACGCATTAAAGCA   1038
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30920___co   1001 TACCGAAGGAAGAATTAGAATCAGCTTTTGAATATGAACGCATTAAAGCA   1050

BSNT_04497___   1039 AACGCATTGCGGCAGCTTATTTAA   1062
                     ||||||||||||||||||||||||
BSU30920___co   1051 AACGCATTGCGGCAGCTTATTTAA   1074


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