Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04560 and BSU31020
See
Amino acid alignment /
Visit
BSNT_04560 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence dna-align/BSNT_04560___yuaF.1.22522.seq
# -bsequence dna-align/BSU31020___yuaF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04560___yuaF-BSU31020___yuaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04560___yuaF-BSU31020___yuaF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04560___yuaF
# 2: BSU31020___yuaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 576
# Identity: 519/576 (90.1%)
# Similarity: 519/576 (90.1%)
# Gaps: 51/576 ( 8.9%)
# Score: 2571.0
#
#
#=======================================
BSNT_04560___ 1 ATGGTAACGGCGGCCGTTCATCAATGCATTGATGAAGAAAGGATGAGGAA 50
BSU31020___yu 0 -------------------------------------------------- 0
BSNT_04560___ 51 ATTGGAGTTATTTGGAGTACCTATACAAACAATTTATCTTTATACGCTTA 100
||||||||||||||||||||||||||||||||.||||||||||||||||
BSU31020___yu 1 -TTGGAGTTATTTGGAGTACCTATACAAACAATGTATCTTTATACGCTTA 49
BSNT_04560___ 101 TTATTGCGGGCAGCCTTACGCTGTTATTCCTGTTTTTCGGAGATGTATTT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31020___yu 50 TTATTGCGGGCAGCCTTACGCTGTTATTCCTGTTTTTCGGAGATGTATTT 99
BSNT_04560___ 151 GCAGGGCTGTCAGAAGGCATTCCGTTTCTTAATCCGACATTAGTGCTCTC 200
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU31020___yu 100 TCAGGGCTGTCAGAAGGCATTCCGTTTCTTAATCCGACATTAGTGCTCTC 149
BSNT_04560___ 201 ATTTTTCACATGTTTTTCAGCGGGCGGATATATAGGTGAACTCGTATTGC 250
||||||.|||||||||||||||||||||||||||||||||||.|||||||
BSU31020___yu 150 ATTTTTTACATGTTTTTCAGCGGGCGGATATATAGGTGAACTTGTATTGC 199
BSNT_04560___ 251 CTCTGTCAAGCTTGCTGATTGCGCTTTTATCTTGCATCCTTTCGATCATG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31020___yu 200 CTCTGTCAAGCTTGCTGATTGCGCTTTTATCTTGCATCCTTTCGATCATG 249
BSNT_04560___ 301 CTGGTGGTATTGCTTCACATCTTTGTGCTGGTGCCATTATCATCTGCAGA 350
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU31020___yu 250 CTGGTGGTATTGCTTCACATCTTTGTACTGGTGCCATTATCATCTGCAGA 299
BSNT_04560___ 351 AGAATCATTGGCATATAGAGAAGATGATCTCAGAGGAAGACTCGGTAAAG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31020___yu 300 AGAATCATTGGCATATAGAGAAGATGATCTCAGAGGAAGACTCGGTAAAG 349
BSNT_04560___ 401 TGATTACAGCTGTGCCGGTTGACGGATTTGGTGAAGTGGTCATAGAAGGG 450
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU31020___yu 350 TGATTACAGCTGTGCCGGTTGACGGGTTTGGTGAAGTGGTCATAGAAGGG 399
BSNT_04560___ 451 ATAGGCGGGACCATTTCAAAGTCAGCGGTCAGTTTTGATAATCAGCAGAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31020___yu 400 ATAGGCGGGACCATTTCAAAGTCAGCGGTCAGTTTTGATAATCAGCAGAT 449
BSNT_04560___ 501 CAGTTACGGGACAACGGTGTTAGTCGTAGATATTAACAACGGAGTTCTTT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31020___yu 450 CAGTTACGGGACAACGGTGTTAGTCGTAGATATTAACAACGGAGTTCTTT 499
BSNT_04560___ 551 CGGTTACTCCGCATGAACCCATTTAA 576
||||||||||||||||||||||||||
BSU31020___yu 500 CGGTTACTCCGCATGAACCCATTTAA 525
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.