Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04566 and BSU31050

See Amino acid alignment / Visit BSNT_04566 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:21
# Commandline: needle
#    -asequence dna-align/BSNT_04566___gbsB.1.22522.seq
#    -bsequence dna-align/BSU31050___gbsB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04566___gbsB-BSU31050___gbsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04566___gbsB-BSU31050___gbsB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04566___gbsB
# 2: BSU31050___gbsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1212
# Identity:    1199/1212 (98.9%)
# Similarity:  1199/1212 (98.9%)
# Gaps:           3/1212 ( 0.2%)
# Score: 5955.0
# 
#
#=======================================

BSNT_04566___      1 ATGATGACATTAAATATGAAGGTAGAAAGCATGCAGAAATTCCACACATT     50
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb      1 ---ATGACATTAAATATGAAGGTAGAAAGCATGCAGAAATTCCACACATT     47

BSNT_04566___     51 TGAAATTCCGACTGTGATTAAGCATGGAATCGGAGCCATCAAGCATACGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb     48 TGAAATTCCGACTGTGATTAAGCATGGAATCGGAGCCATCAAGCATACGG     97

BSNT_04566___    101 GTGAGGAAGTAGCTGCACTGGGCGTTTCAAAAGCGCTCCTTGTCACAGAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb     98 GTGAGGAAGTAGCTGCACTGGGCGTTTCAAAAGCGCTCCTTGTCACAGAC    147

BSNT_04566___    151 CCAGGGATTTATAAAGCCGGTGTTGCTGATCCTGTAATCGAATCACTTAA    200
                     ||.|||||||||||||||||||||||||||||.|||||||||||||||||
BSU31050___gb    148 CCTGGGATTTATAAAGCCGGTGTTGCTGATCCCGTAATCGAATCACTTAA    197

BSNT_04566___    201 AGAAGCAGGCATTGAAGTGGTGCTCTTTAATAAAGTTGAGCCAAACCCGC    250
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU31050___gb    198 AGAAGCAGGCATTGAAGTGGTACTCTTTAATAAAGTTGAGCCAAACCCGC    247

BSNT_04566___    251 CTGTCCGTCTGGTGAATGAAGGATCTGAGCTTTACAAAAAAGAGAACTGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb    248 CTGTCCGTCTGGTGAATGAAGGATCTGAGCTTTACAAAAAAGAGAACTGT    297

BSNT_04566___    301 AATGGTTTGGTGGCAGTCGGAGGCGGAAGCTCCATGGATACAGCAAAAGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb    298 AATGGTTTGGTGGCAGTCGGAGGCGGAAGCTCCATGGATACAGCAAAAGC    347

BSNT_04566___    351 AATCGGAGTAGAAGCGACTCACGAAGGAAGCGTGCTTGATTATGAAGCGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb    348 AATCGGAGTAGAAGCGACTCACGAAGGAAGCGTGCTTGATTATGAAGCGG    397

BSNT_04566___    401 CAGATGGGAAAAAACCGCTGGAAAACCGCATTCCTCCGCTGACGACAATT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb    398 CAGATGGGAAAAAACCGCTGGAAAACCGCATTCCTCCGCTGACGACAATT    447

BSNT_04566___    451 CCCACTACAGCTGGAACAGGATCAGAAGTAACCCAATGGGCGGTTATCAC    500
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU31050___gb    448 CCCACTACAGCTGGAACCGGATCAGAAGTAACCCAATGGGCGGTTATCAC    497

BSNT_04566___    501 AGATGAAGAAAGAGAATTCAAATTCAACACGGGCGGTCCGCTGATTGCAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb    498 AGATGAAGAAAGAGAATTCAAATTCAACACGGGCGGTCCGCTGATTGCAG    547

BSNT_04566___    551 CGCACTTGACCATCATTGATCCTGAGCTTCATGTTTCAATGCCTCCGCAT    600
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU31050___gb    548 CGCACTTGACAATCATTGATCCTGAGCTTCATGTTTCAATGCCTCCGCAT    597

BSNT_04566___    601 GTAACAGCTATGACGGGAATTGATGCGCTCGCCCATGCCATTGAGTGCTA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb    598 GTAACAGCTATGACGGGAATTGATGCGCTCGCCCATGCCATTGAGTGCTA    647

BSNT_04566___    651 TACAATGAAATTTGCACAGCCAATCACGGATGCGGTTGCCTTAATGGCGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb    648 TACAATGAAATTTGCACAGCCAATCACGGATGCGGTTGCCTTAATGGCGA    697

BSNT_04566___    701 TTGAGTATGCCGCTCATTACATTAAGAGGGCATTTGCTGACGGAGAGGAT    750
                     ||||||||||||||||||||||.|||||||||||||||||.|||||||||
BSU31050___gb    698 TTGAGTATGCCGCTCATTACATCAAGAGGGCATTTGCTGATGGAGAGGAT    747

BSNT_04566___    751 CTGGAAGCAAGGTACGGAATGGCGCAGGCTGCGATGCTTGCCGGTCTTTC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb    748 CTGGAAGCAAGGTACGGAATGGCGCAGGCTGCGATGCTTGCCGGTCTTTC    797

BSNT_04566___    801 TTACGGAAGTGAATCAGCGGGCGCGGCTCATGCGATGAGCCAAACGCTTG    850
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU31050___gb    798 TTACGGAAGTGAATCAGCGGGCGCTGCTCATGCGATGAGCCAAACGCTTG    847

BSNT_04566___    851 GCGGTATTATCCCAGTCGCTCACGGCCAATGTGTAGCGGCGATGATGGGC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb    848 GCGGTATTATCCCAGTCGCTCACGGCCAATGTGTAGCGGCGATGATGGGC    897

BSNT_04566___    901 CCTGTCATGGAATACAACTGGAAGGGCTATCCTGAGAAGTTTGCGCGTAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb    898 CCTGTCATGGAATACAACTGGAAGGGCTATCCTGAGAAGTTTGCGCGTAT    947

BSNT_04566___    951 TGCGAAAGCGTTCGGTATTGATACAAGCAAGATGACAACAGAAGAAGCTG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb    948 TGCGAAAGCGTTCGGTATTGATACAAGCAAGATGACAACAGAAGAAGCTG    997

BSNT_04566___   1001 CGAAAGCATCTGTCAATTGGATGTATGATCTGGTCGAAGATTTAGAAGTG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb    998 CGAAAGCATCTGTCAATTGGATGTATGATCTGGTCGAAGATTTAGAAGTG   1047

BSNT_04566___   1051 CCGACTTTAGAAGAGCAGGGAGTATCACCTGATATGATCGAACGCTTGTC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31050___gb   1048 CCGACTTTAGAAGAGCAGGGAGTATCACCTGATATGATCGAACGCTTGTC   1097

BSNT_04566___   1101 TAAAGAAGCTATGAAAGATCCGCAAACCTTCGGAAACCCTAGAGATTTAA   1150
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU31050___gb   1098 TAAAGAAGCAATGAAAGATCCGCAAACCTTCGGAAACCCTAGAGATTTAA   1147

BSNT_04566___   1151 ATGAAAAAGCATACAACTGGATCTACAAGCGCTGCTTTAACCTTACGCCT   1200
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU31050___gb   1148 ATGAAAAAGCATACAACTGGATCTACAAACGCTGCTTTAACCTTACGCCT   1197

BSNT_04566___   1201 AAAACGGTATAA   1212
                     ||||||||||||
BSU31050___gb   1198 AAAACGGTATAA   1209


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