Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04604 and BSU31280

See Amino acid alignment / Visit BSNT_04604 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:27
# Commandline: needle
#    -asequence dna-align/BSNT_04604___yugU.1.22522.seq
#    -bsequence dna-align/BSU31280___yugU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04604___yugU-BSU31280___yugU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04604___yugU-BSU31280___yugU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04604___yugU
# 2: BSU31280___yugU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity:     394/399 (98.7%)
# Similarity:   394/399 (98.7%)
# Gaps:           0/399 ( 0.0%)
# Score: 1950.0
# 
#
#=======================================

BSNT_04604___      1 ATGCTGAAAACACTGCAAATCAAAACAACCAAACGAGATGAAATGATTGA     50
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU31280___yu      1 ATGCTGAAAACACTGCAAATCAAAACAACCAAACGAGATGAAATGATAGA     50

BSNT_04604___     51 TATCACCCGGGAGGTGGAAGCATTTCTTCAAGAAACAGGTATAACGAGCG    100
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU31280___yu     51 TATCACCCGGGAGGTGGAAGCGTTTCTTCAAGAAACAGGTATAACGAGCG    100

BSNT_04604___    101 GCGCAGCGCTGATTTACTGTCCGCATACGACTGCGGGCATTACAATTAAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31280___yu    101 GCGCAGCGCTGATTTACTGTCCGCATACGACTGCGGGCATTACAATTAAT    150

BSNT_04604___    151 GAAAATGCCGATCCGGACGTCAAAAAAGATATGCTCAGAAGGTTTGATGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31280___yu    151 GAAAATGCCGATCCGGACGTCAAAAAAGATATGCTCAGAAGGTTTGATGA    200

BSNT_04604___    201 GGTATATCCGTGGGAACATGAGCTGGACCGCCATATGGAGGGCAATACAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31280___yu    201 GGTATATCCGTGGGAACATGAGCTGGACCGCCATATGGAGGGCAATACAG    250

BSNT_04604___    251 CTGCACACATGAAGTCGAGTACGGTCGGAGCTTCACAGCATGTCATTGTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31280___yu    251 CTGCACACATGAAGTCGAGTACGGTCGGAGCTTCACAGCATGTCATTGTG    300

BSNT_04604___    301 GAAAACGGCCGGCTCATTCTTGGAACGTGGCAGGGCATTTATTTCTGTGA    350
                     ||||||||||||||.||||||||||||||||||||||||||||||||.||
BSU31280___yu    301 GAAAACGGCCGGCTTATTCTTGGAACGTGGCAGGGCATTTATTTCTGCGA    350

BSNT_04604___    351 ATTTGACGGCCCTCGCACCCGGACATGCTATATCAAAATGATGGGATAA    399
                     |||||||||.|||||||||||||||||||||||||||||||||||||||
BSU31280___yu    351 ATTTGACGGGCCTCGCACCCGGACATGCTATATCAAAATGATGGGATAA    399


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