Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04614 and BSU31322

See Amino acid alignment / Visit BSNT_04614 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:28
# Commandline: needle
#    -asequence dna-align/BSNT_04614.1.22522.seq
#    -bsequence dna-align/BSU31322___yugO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04614-BSU31322___yugO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04614-BSU31322___yugO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04614
# 2: BSU31322___yugO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 987
# Identity:     974/987 (98.7%)
# Similarity:   974/987 (98.7%)
# Gaps:           0/987 ( 0.0%)
# Score: 4818.0
# 
#
#=======================================

BSNT_04614         1 ATGAAATCAAATCGGATATTTATTTCATGGCTCAGGTGGCCGTTATTTAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31322___yu      1 ATGAAATCAAATCGGATATTTATTTCATGGCTCAGGTGGCCGTTATTTAT     50

BSNT_04614        51 CCGAATCGGGGTTATTATTTTATGTCTGATTCTTTTGTTCGGCCAAATCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31322___yu     51 CCGAATCGGGGTTATTATTTTATGTCTGATTCTTTTGTTCGGCCAAATCA    100

BSNT_04614       101 TTTATATACTTGAGCCTAAGCAGTTCACTTCGGTATTCGAAGGCATTTGG    150
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU31322___yu    101 TTTATATACTTGAGCCTAAGCAGTTCACTTCGGTATTCGAAGGTATTTGG    150

BSNT_04614       151 TGGGCTGTCGTTACGGTTTCCACAGTCGGTTATGGAGACTATGTGCCGCA    200
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU31322___yu    151 TGGGCTGTCGTTACGGTTTCTACAGTCGGTTATGGAGACTATGTGCCGCA    200

BSNT_04614       201 CACGCCGCTGGGACAGGCAGCCGGAATACTGCTGATTTTGAGCGGAGCAA    250
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU31322___yu    201 CACTCCGCTGGGACAGGCAGCCGGAATACTGCTGATTTTGAGCGGAGCAA    250

BSNT_04614       251 GCTTTGTCACAGCGTATTTCGCTACGTTATCAGCGGCCGCATTCAGCAGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31322___yu    251 GCTTTGTCACAGCGTATTTCGCTACGTTATCAGCGGCCGCATTCAGCAGA    300

BSNT_04614       301 CAGCATCGCTACATCGAAGGAAAAGTTGCTTACAAAGGCCGGGACCACAT    350
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU31322___yu    301 CAGCATCGCTACATTGAAGGAAAAGTTGCTTACAAAGGCCGGGACCACAT    350

BSNT_04614       351 CATTCTGATCGGGTGGAATGAAAAAACAAACCGGCTTTTGAAGGACCTTC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31322___yu    351 CATTCTGATCGGGTGGAATGAAAAAACAAACCGGCTTTTGAAGGACCTTC    400

BSNT_04614       401 AGCTTGCCGCCCCTTCCAAAACAGTCGTACTAATCGATGAATCCTTAACA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31322___yu    401 AGCTTGCCGCCCCTTCCAAAACAGTCGTACTAATCGATGAATCCTTAACA    450

BSNT_04614       451 GAAGGCCCGCTTATTGAAAACGTTCATTTCATACGCGGGCACGCTGCCGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31322___yu    451 GAAGGCCCGCTTATTGAAAACGTTCATTTCATACGCGGGCACGCTGCCGA    500

BSNT_04614       501 TGATGGGACACTGAAACGGGCCAATATTACTGAAGCGGAATCAGTGATGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31322___yu    501 TGATGGGACACTGAAACGGGCCAATATTACTGAAGCGGAATCAGTGATGA    550

BSNT_04614       551 TTACTGCCGATCAGTATAAAAGTGAAACTGATGCTGATATGCTGTCAGTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31322___yu    551 TTACTGCCGATCAGTATAAAAGTGAAACTGATGCTGATATGCTGTCAGTG    600

BSNT_04614       601 CTGACTCTTTTATCTGTTAAAGGGCTTAATCCCCTTGCTTACTGCATCGT    650
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU31322___yu    601 CTGACTCTTTTATCTGTTAAAGGTCTTAATCCCCTTGCTTACTGCATCGT    650

BSNT_04614       651 CGAAATTTTGACTGACCGTTTTGTCACCAATGCAGAGCGGGCAGGCGCAA    700
                     |||.|||||.|||||||||||||||||||||||.||.|||||||||||||
BSU31322___yu    651 CGAGATTTTAACTGACCGTTTTGTCACCAATGCGGAACGGGCAGGCGCAA    700

BSNT_04614       701 ACCAAATCATCGGAACTTCAGAATTTATCAGCCGGGCGATGCTGCAGCAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31322___yu    701 ACCAAATCATCGGAACTTCAGAATTTATCAGCCGGGCGATGCTGCAGCAT    750

BSNT_04614       751 TACCAAGTCAAGTTACGGCCGTCTAAACAGCAGATCGGAATCAAGCTGAC    800
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU31322___yu    751 TACCAAGTCAAGTTACGGCCGTCTAAACAGCAGAACGGAATCAAGCTGAC    800

BSNT_04614       801 ACTTGATCAGCATGTGGAGCTTCTTGCTGTTCCTGACGAACTAAAGGGAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31322___yu    801 ACTTGATCAGCATGTGGAGCTTCTTGCTGTTCCTGACGAACTAAAGGGAG    850

BSNT_04614       851 CGGCTTACAAAACCTGTGTTCTCTATTTCCTTGATCACAACACAACAATT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31322___yu    851 CGGCTTACAAAACCTGTGTTCTCTATTTCCTTGATCACAACACAACAATT    900

BSNT_04614       901 ATAGGCGTACAAAAAAAGGAGGGACCGATGCTTTCCCCTCCTCTTACATA    950
                     ||||||.||||||||||||||||.||||||||||||||||||||||||||
BSU31322___yu    901 ATAGGCATACAAAAAAAGGAGGGGCCGATGCTTTCCCCTCCTCTTACATA    950

BSNT_04614       951 CAAGGTGCTCGAAACAGACCAATTCCTTGCCATCTAG    987
                     ||||||||||||||||||.||||||||||||||||||
BSU31322___yu    951 CAAGGTGCTCGAAACAGATCAATTCCTTGCCATCTAG    987


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