Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04718 and BSU32070

See Amino acid alignment / Visit BSNT_04718 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:52
# Commandline: needle
#    -asequence dna-align/BSNT_04718___yuiC.1.22522.seq
#    -bsequence dna-align/BSU32070___yuiC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04718___yuiC-BSU32070___yuiC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04718___yuiC-BSU32070___yuiC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04718___yuiC
# 2: BSU32070___yuiC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 657
# Identity:     650/657 (98.9%)
# Similarity:   650/657 (98.9%)
# Gaps:           3/657 ( 0.5%)
# Score: 3234.0
# 
#
#=======================================

BSNT_04718___      1 ---ATGTTGAATATGATCAGACGTTTGCTGATGACCTGTTTATTTCTGCT     47
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU32070___yu      1 ATGATGTTGAATATGATCAGACGTTTGCTGATGACCTGTTTATTTCTGCT     50

BSNT_04718___     48 TGCATTTGGCACGACATTTTTATCAGTGTCAGGAATTGAAGCGAAGGACT     97
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32070___yu     51 TGCATTTGGCACGACATTTTTATCAGTGTCAGGAATTGAAGCGAAGGACT    100

BSNT_04718___     98 TGTCAAAATGGGTGCAGGAACATCAGGAAAAGCACTTGAAGCATGCAGGA    147
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32070___yu    101 TGTCAAAATGGGTGCAGGAACATCAGGAAAAGCACTTGAAGCATGCAGGA    150

BSNT_04718___    148 CTGACATTAAAAGCATTGCAGCAGAAACAAACACAAACCACGTCCGCGGC    197
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU32070___yu    151 CTGAGATTAAAAGCATTGCAGCAGAAACAAACACAAACCACGTCCGCGGC    200

BSNT_04718___    198 TGAGGATAAAACTAAACCGTTAGAAGAGGCATTTGATTGGGATGAATATC    247
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU32070___yu    201 TGAGGATAAAACAAAACCGTTAGAAGAGGCATTTGATTGGGATGAATATC    250

BSNT_04718___    248 CAGTCCAAAGAGTAACAGCAACAGGCTACACAGCAGGAGCTGAGTCGACG    297
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32070___yu    251 CAGTCCAAAGAGTAACAGCAACAGGCTACACAGCAGGAGCTGAGTCGACG    300

BSNT_04718___    298 GGCAAAAATCCCGGTGATCCATTATACGGGCTTACATATTCAGGTGTGAA    347
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32070___yu    301 GGCAAAAATCCCGGTGATCCATTATACGGGCTTACATATTCAGGTGTGAA    350

BSNT_04718___    348 AGTGAAACGGGATTTATATTCCACGGTTGCTGCTGACCCGTCCGTTTTCC    397
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32070___yu    351 AGTGAAACGGGATTTATATTCCACGGTTGCTGCTGACCCGTCCGTTTTCC    400

BSNT_04718___    398 CGATCGGAACAATTTTATTCATTCCGAACTACGGTCTCGGCGTTGTAGCC    447
                     ||||||||||||||||||||||||||||||||||||||||.|||||.|||
BSU32070___yu    401 CGATCGGAACAATTTTATTCATTCCGAACTACGGTCTCGGAGTTGTGGCC    450

BSNT_04718___    448 GACACAGGATCAGCTATTAAGGGAAACCGCCTTGATCTGTACTTTGAGAC    497
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32070___yu    451 GACACAGGATCAGCTATTAAGGGAAACCGCCTTGATCTGTACTTTGAGAC    500

BSNT_04718___    498 AGTCAAAGATGTATACAATGAATGGGGCAAAAAAACCCTTGATGTATATG    547
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32070___yu    501 AGTCAAAGATGTATACAATGAATGGGGCAAAAAAACCCTTGATGTATATG    550

BSNT_04718___    548 TGATTAAAAAGGGAACGGGAAAGATTACCGAGGATGAGCTTGAGAAGCTC    597
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32070___yu    551 TGATTAAAAAGGGAACGGGAAAGATTACCGAGGATGAGCTTGAGAAGCTC    600

BSNT_04718___    598 AATGAAACAAAATCTTTGCAAGTGTTCAGAAATCAATATAAAACGGTGAA    647
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32070___yu    601 AATGAAACAAAATCTTTGCAAGTGTTCAGAAATCAATATAAAACGGTGAA    650

BSNT_04718___    648 AGAATAA    654
                     |||||||
BSU32070___yu    651 AGAATAA    657


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