Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04781 and BSU32310

See Amino acid alignment / Visit BSNT_04781 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:56
# Commandline: needle
#    -asequence dna-align/BSNT_04781.1.22522.seq
#    -bsequence dna-align/BSU32310___yutD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04781-BSU32310___yutD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04781-BSU32310___yutD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04781
# 2: BSU32310___yutD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     275/276 (99.6%)
# Similarity:   275/276 (99.6%)
# Gaps:           0/276 ( 0.0%)
# Score: 1371.0
# 
#
#=======================================

BSNT_04781         1 ATGATTCTTATTCAAAATGCTGAATTTGAATTGGTGCACAATTTCAAAGA     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU32310___yu      1 ATGATTCTTATTCAAAATGCCGAATTTGAATTGGTGCACAATTTCAAAGA     50

BSNT_04781        51 CGGCTTCAACGAAGAGGCTTTTAAAGCCCGCTACTCCGATATATTAAATA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32310___yu     51 CGGCTTCAACGAAGAGGCTTTTAAAGCCCGCTACTCCGATATATTAAATA    100

BSNT_04781       101 AATACGATTATATTGTGGGAGACTGGGGATACGGTCAGTTAAGGCTCAAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32310___yu    101 AATACGATTATATTGTGGGAGACTGGGGATACGGTCAGTTAAGGCTCAAG    150

BSNT_04781       151 GGCTTCTTTGACGACCAGAATCAAAAGGCAACCTTCGAAACGAAAATCAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32310___yu    151 GGCTTCTTTGACGACCAGAATCAAAAGGCAACCTTCGAAACGAAAATCAG    200

BSNT_04781       201 CACATTAGATGAATATATTTACGAATACTGCAATTTCGGCTGTGCGTATT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32310___yu    201 CACATTAGATGAATATATTTACGAATACTGCAATTTCGGCTGTGCGTATT    250

BSNT_04781       251 TTGTCTTGAAACGGATCAGAAAATAA    276
                     ||||||||||||||||||||||||||
BSU32310___yu    251 TTGTCTTGAAACGGATCAGAAAATAA    276


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