Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04788 and BSU32360

See Amino acid alignment / Visit BSNT_04788 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:56
# Commandline: needle
#    -asequence dna-align/BSNT_04788___yunC.1.22522.seq
#    -bsequence dna-align/BSU32360___yunC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04788___yunC-BSU32360___yunC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04788___yunC-BSU32360___yunC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04788___yunC
# 2: BSU32360___yunC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     296/306 (96.7%)
# Similarity:   296/306 (96.7%)
# Gaps:           0/306 ( 0.0%)
# Score: 1440.0
# 
#
#=======================================

BSNT_04788___      1 GTGGTAAACCTGACACCGATCATGATAGAAGGACAGCCTTTTACAGCTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32360___yu      1 GTGGTAAACCTGACACCGATCATGATAGAAGGACAGCCTTTTACAGCTGT     50

BSNT_04788___     51 GACAGTGAAACTTCCCAAAACGAATTTTATGGCCGTCGCCAATGATCACG    100
                     ||||||.||.||||||||||||||||||||||||||||||||||||||||
BSU32360___yu     51 GACAGTAAAGCTTCCCAAAACGAATTTTATGGCCGTCGCCAATGATCACG    100

BSNT_04788___    101 GATACATTATGTGCGGCGCGCTTGATGTGGCGCTGCTGAATGAAAAATTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32360___yu    101 GATACATTATGTGCGGCGCGCTTGATGTGGCGCTGCTGAATGAAAAATTA    150

BSNT_04788___    151 AAGGAGCGCGGCATTGTTGCTGGTCGCGCAGTTGGTGTCCGCACCATTGA    200
                     ||||||||||||||.||.||.||.||||||||||||||||||||||||||
BSU32360___yu    151 AAGGAGCGCGGCATCGTGGCGGGACGCGCAGTTGGTGTCCGCACCATTGA    200

BSNT_04788___    201 CCAGCTGTTAGACGCACCTTTAGAATCCGTCACGTACGCCGCGAAAGATC    250
                     |||||||||||||||||||||||||||||||||||||||.|||.||||||
BSU32360___yu    201 CCAGCTGTTAGACGCACCTTTAGAATCCGTCACGTACGCTGCGGAAGATC    250

BSNT_04788___    251 TTGGCATCAAAGTCGGTATGAGCGGCAGAGAAGCGCTTTTAAAAATGGTG    300
                     ||||||||||||||||.||||||||||||||||||||||||||||||.||
BSU32360___yu    251 TTGGCATCAAAGTCGGCATGAGCGGCAGAGAAGCGCTTTTAAAAATGATG    300

BSNT_04788___    301 AAATAA    306
                     ||||||
BSU32360___yu    301 AAATAA    306


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