Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04823 and BSU32550

See Amino acid alignment / Visit BSNT_04823 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:01
# Commandline: needle
#    -asequence dna-align/BSNT_04823___yurJ.1.22522.seq
#    -bsequence dna-align/BSU32550___yurJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04823___yurJ-BSU32550___yurJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04823___yurJ-BSU32550___yurJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04823___yurJ
# 2: BSU32550___yurJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1104
# Identity:    1099/1104 (99.5%)
# Similarity:  1099/1104 (99.5%)
# Gaps:           0/1104 ( 0.0%)
# Score: 5475.0
# 
#
#=======================================

BSNT_04823___      1 ATGGCTTCATTAACATTTGAACACGTCAAAAAATCATATCACTCACAATT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu      1 ATGGCTTCATTAACATTTGAACACGTCAAAAAATCATATCACTCACAATT     50

BSNT_04823___     51 AACCGTGAAGGACTTTGATTTAGATGTAAAGGATAAGGAGCTTTTGGTGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu     51 AACCGTGAAGGACTTTGATTTAGATGTAAAGGATAAGGAGCTTTTGGTGC    100

BSNT_04823___    101 TGGTGGGGCCGTCAGGATGCGGAAAATCAACAACGCTGCGGATGGTGGCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    101 TGGTGGGGCCGTCAGGATGCGGAAAATCAACAACGCTGCGGATGGTGGCT    150

BSNT_04823___    151 GGATTAGAAAGCATTTCTGAAGGAAATCTTCTTATTGATGGGGAGCGGGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    151 GGATTAGAAAGCATTTCTGAAGGAAATCTTCTTATTGATGGGGAGCGGGT    200

BSNT_04823___    201 CAATGATCTTCCGCCGAAAGAACGTGATATTGCGATGGTATTCCAGAACT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    201 CAATGATCTTCCGCCGAAAGAACGTGATATTGCGATGGTATTCCAGAACT    250

BSNT_04823___    251 ATGCGCTTTATCCGCATATGACGGTTTTTGATAATATGGCGTTTGGATTA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    251 ATGCGCTTTATCCGCATATGACGGTTTTTGATAATATGGCGTTTGGATTA    300

BSNT_04823___    301 AAGCTCAGAAAGATGGCGAAACAGGAAATTGCCGAGCGGGTTCATGCGGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    301 AAGCTCAGAAAGATGGCGAAACAGGAAATTGCCGAGCGGGTTCATGCGGC    350

BSNT_04823___    351 AGCCAGAATTTTAGAAATTGAACATTTGCTGAAGAGAAAACCGAAGGCGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    351 AGCCAGAATTTTAGAAATTGAACATTTGCTGAAGAGAAAACCGAAGGCGC    400

BSNT_04823___    401 TCTCCGGCGGGCAGCGGCAAAGGGTGGCGCTTGGCAGGTCGATTGTGAGG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    401 TCTCCGGCGGGCAGCGGCAAAGGGTGGCGCTTGGCAGGTCGATTGTGAGG    450

BSNT_04823___    451 GAGCCGAAGGTCTTTTTAATGGACGAGCCGCTTTCTAATCTGGATGCAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    451 GAGCCGAAGGTCTTTTTAATGGACGAGCCGCTTTCTAATCTGGATGCAAA    500

BSNT_04823___    501 ACTAAGAGTGACGATGCGGACAGAAATCAGCAAGCTGCACCAGCGATTAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    501 ACTAAGAGTGACGATGCGGACAGAAATCAGCAAGCTGCACCAGCGATTAG    550

BSNT_04823___    551 AGGCAACGATCATTTATGTCACGCATGACCAGACCGAAGCAATGACAATG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    551 AGGCAACGATCATTTATGTCACGCATGACCAGACCGAAGCAATGACAATG    600

BSNT_04823___    601 GGAGATCGGATTGTCGTCATGAATGAAGGGGAAATTCAGCAAGTGGCGAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    601 GGAGATCGGATTGTCGTCATGAATGAAGGGGAAATTCAGCAAGTGGCGAA    650

BSNT_04823___    651 ACCTCATGACATTTATCGTTACCCGGCCAATTTGTTTGTCGCAGGCTTCA    700
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU32550___yu    651 ACCTCATGACATTTATCATTACCCGGCCAATTTGTTTGTCGCAGGCTTCA    700

BSNT_04823___    701 TTGGCTCTCCCGGAATGAACTTTTTGAAAGGCATCATAGAACAGCAGCAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    701 TTGGCTCTCCCGGAATGAACTTTTTGAAAGGCATCATAGAACAGCAGCAT    750

BSNT_04823___    751 GGCGAGCTTTTTTTTACAAATTCTTCGATCCGGCTTCATATTCCTGAAGA    800
                     ||||||||.|||||.|||||||||||||||||||||||||||||||||||
BSU32550___yu    751 GGCGAGCTGTTTTTCACAAATTCTTCGATCCGGCTTCATATTCCTGAAGA    800

BSNT_04823___    801 AAAAGCAAAGCGGCTGAAGGAAAAGGGATATGCCGGAGAACAGATGATTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    801 AAAAGCAAAGCGGCTGAAGGAAAAGGGATATGCCGGAGAACAGATGATTG    850

BSNT_04823___    851 CCGGTGTACGGCCGGAGCACATCACACAAATGACAGGAAATGACCAGTTG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    851 CCGGTGTACGGCCGGAGCACATCACACAAATGACAGGAAATGACCAGTTG    900

BSNT_04823___    901 TTTGATTCAGTGTTTCAAGCGAACGTGGAAGTGAATGAAAATCTGGGCTC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu    901 TTTGATTCAGTGTTTCAAGCGAACGTGGAAGTGAATGAAAATCTGGGCTC    950

BSNT_04823___    951 GGAGCTCATAGTGCATGTCATGGCTGGGGACGAGCGACTCAAGGTCCGCC   1000
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU32550___yu    951 GGAGCTCATAGTGCATGTCATGGCTGGGGACGAGCGGCTCAAGGTCCGCC   1000

BSNT_04823___   1001 TGGACGGAAACACGCGAATCGATGCAGGCGATTCAATCCAGCTCTCAGTG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32550___yu   1001 TGGACGGAAACACGCGAATCGATGCAGGCGATTCAATCCAGCTCTCAGTG   1050

BSNT_04823___   1051 AAAATGGACCACGTCGTCTTTTTCGATGTGGAAACGGAAGAGGCTGTGTA   1100
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU32550___yu   1051 AAAATGGACCACGTCGTCTTTTTCGATGCGGAAACGGAAGAGGCTGTGTA   1100

BSNT_04823___   1101 TTAG   1104
                     ||||
BSU32550___yu   1101 TTAG   1104


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