Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04834 and BSU32620
See
Amino acid alignment /
Visit
BSNT_04834 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:04
# Commandline: needle
# -asequence dna-align/BSNT_04834___yurQ.1.22522.seq
# -bsequence dna-align/BSU32620___yurQ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04834___yurQ-BSU32620___yurQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04834___yurQ-BSU32620___yurQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04834___yurQ
# 2: BSU32620___yurQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 375
# Identity: 373/375 (99.5%)
# Similarity: 373/375 (99.5%)
# Gaps: 0/375 ( 0.0%)
# Score: 1857.0
#
#
#=======================================
BSNT_04834___ 1 TTGATAAAAATTGATATACCCGCACCGAATGTCACCATCACTGAACGACA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32620___yu 1 TTGATAAAAATTGATATACCCGCACCGAATGTCACCATCACTGAACGACA 50
BSNT_04834___ 51 GCAGTCAGCTAATGATAACGAGCCGAAGATAAAACCGATTCACGGATTCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32620___yu 51 GCAGTCAGCTAATGATAACGAGCCGAAGATAAAACCGATTCACGGATTCA 100
BSNT_04834___ 101 TTGACTTTCACCAGATCCCAAGGGACAAAGGCGGCATTTTTATGTTTTAC 150
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU32620___yu 101 TCGACTTTCACCAGATCCCAAGGGACAAAGGCGGCATTTTTATGTTTTAC 150
BSNT_04834___ 151 AACATTCATGACGAGCTGCTGTTTGTCGGTAAAGCCAGAAAGTTAAGACA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32620___yu 151 AACATTCATGACGAGCTGCTGTTTGTCGGTAAAGCCAGAAAGTTAAGACA 200
BSNT_04834___ 201 GAGAATTAAGAAGCATTTCGAAGACACTGTTTCACCGATCAAACATCACA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32620___yu 201 GAGAATTAAGAAGCATTTCGAAGACACTGTTTCACCGATCAAACATCACA 250
BSNT_04834___ 251 GAGATGAAGTTTATAAAATTGAGGTATGTGTAGTTGATGATCCAATGGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32620___yu 251 GAGATGAAGTTTATAAAATTGAGGTATGTGTAGTTGATGATCCAATGGAA 300
BSNT_04834___ 301 AGAGAGATTTATGAAACATATATCATCAATACACAGCACTCGAAGTACAA 350
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU32620___yu 301 AGAGAGATTTACGAAACATATATCATCAATACACAGCACTCGAAGTACAA 350
BSNT_04834___ 351 TATAGACAAGGTATTTTTTAAATAA 375
|||||||||||||||||||||||||
BSU32620___yu 351 TATAGACAAGGTATTTTTTAAATAA 375
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.