Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04882 and BSU32900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:22
# Commandline: needle
# -asequence dna-align/BSNT_04882.1.22522.seq
# -bsequence dna-align/BSU32900___yusR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04882-BSU32900___yusR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04882-BSU32900___yusR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04882
# 2: BSU32900___yusR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 741
# Identity: 375/741 (50.6%)
# Similarity: 375/741 (50.6%)
# Gaps: 351/741 (47.4%)
# Score: 1815.0
#
#
#=======================================
BSNT_04882 1 ATGAATGTCTTGAACAAAATAGCTCTCGTAACGGGGGGCGGCACAGGAAT 50
BSU32900___yu 0 -------------------------------------------------- 0
BSNT_04882 51 CGGAAAAGCAGCCAGTATGGAATTGGCAAAGCGCGGGGCGATTGTGGCGG 100
BSU32900___yu 0 -------------------------------------------------- 0
BSNT_04882 101 TGAATTATTCACGCTCGCAATCAGAAGCGGAGGAAACAGTGGAAAAGATT 150
BSU32900___yu 0 -------------------------------------------------- 0
BSNT_04882 151 CGAAAAGCTGGCGGGCAAGCCTTCGCCATCCAAGCAGATGTATCTAAAAA 200
BSU32900___yu 0 -------------------------------------------------- 0
BSNT_04882 201 CAGCGACGTGCAGGATATGGTTCAAACAATCGTGAAAACATACGGCCCGA 250
BSU32900___yu 0 -------------------------------------------------- 0
BSNT_04882 251 TTGATGTTTTAGTCAACAATGCCAGCATTACACGGCATATTCCAATGGAT 300
BSU32900___yu 0 -------------------------------------------------- 0
BSNT_04882 301 GATCTTGAGGCTGCGACAGAAGACGTCTGGGATGAGCTGTACGCCGTCAA 350
BSU32900___yu 0 -------------------------------------------------- 0
BSNT_04882 351 TGTGAAAGGGATGTTTTTCTGCGCGCGGGCAGTGGTTCCGTTCATGAAGA 400
|||||||||||||||||||||||||||||||||||||||||||||||||
BSU32900___yu 1 -GTGAAAGGGATGTTTTTCTGCGCGCGGGCAGTGGTTCCGTTCATGAAGA 49
BSNT_04882 401 AAAGCAAGGCCGGGGCGATTGTAAACGTCGGCAGCATTGCAGGGGTAACT 450
|||||||||.|||||||||.|||||||||||||||||.||||||.|||||
BSU32900___yu 50 AAAGCAAGGACGGGGCGATCGTAAACGTCGGCAGCATCGCAGGGATAACT 99
BSNT_04882 451 GGTGCCGGCTCATCTATGCCTTACGCAGTATCAAAATCGGCGGTGCACGG 500
||||||||||||||.|||||||||||||||||||||||.|||||||||||
BSU32900___yu 100 GGTGCCGGCTCATCAATGCCTTACGCAGTATCAAAATCAGCGGTGCACGG 149
BSNT_04882 501 TTTAACGAAATCATTGGCTCACGCCTTAGCGCCTGAAATCAGAGTGAGCG 550
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU32900___yu 150 TTTAACGAAATCATTGGCCCACGCCTTAGCGCCTGAAATCAGAGTGAGCG 199
BSNT_04882 551 GTGTAGCACCAGGAGCTGTGGCAACGAGATGGTGGGCTGGCCGGGAAGAA 600
|||||||||||||||||||||||||||||||||||||.||.|||||||||
BSU32900___yu 200 GTGTAGCACCAGGAGCTGTGGCAACGAGATGGTGGGCCGGACGGGAAGAA 249
BSNT_04882 601 AAAATGAAAAGCATGATTGGCTCTTTGCCGCTGCAGTGTATTGCTGAACC 650
|||||||||||||||||.||||||||||.|||||||||||||||||||||
BSU32900___yu 250 AAAATGAAAAGCATGATCGGCTCTTTGCTGCTGCAGTGTATTGCTGAACC 299
BSNT_04882 651 AGAGGAGGTTGCCAAATTGATTTGTTCATTAGTTGAACAGGAATCACTCA 700
|||.||.|||||||||||||||||||||.||.||||||||||||||||||
BSU32900___yu 300 AGATGATGTTGCCAAATTGATTTGTTCACTAATTGAACAGGAATCACTCA 349
BSNT_04882 701 CAGGCCAAATTATCACAATTGACAGCGGACAGACGCTGTAA 741
|||||||||||||||||||||||||||||||||||||||||
BSU32900___yu 350 CAGGCCAAATTATCACAATTGACAGCGGACAGACGCTGTAA 390
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