Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04976 and BSU33360

See Amino acid alignment / Visit BSNT_04976 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:31
# Commandline: needle
#    -asequence dna-align/BSNT_04976___yvgJ.1.22522.seq
#    -bsequence dna-align/BSU33360___yvgJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04976___yvgJ-BSU33360___yvgJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04976___yvgJ-BSU33360___yvgJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04976___yvgJ
# 2: BSU33360___yvgJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1854
# Identity:    1830/1854 (98.7%)
# Similarity:  1830/1854 (98.7%)
# Gaps:           0/1854 ( 0.0%)
# Score: 9054.0
# 
#
#=======================================

BSNT_04976___      1 ATGAAAGGAACCTTTTTTCACAATCAGCGGTTTTTATGTTTTTCGATCTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv      1 ATGAAAGGAACCTTTTTTCACAATCAGCGGTTTTTATGTTTTTCGATCTT     50

BSNT_04976___     51 ATTTATGTGGATCAAAACGTATGTGATATATAAACTCGGCTTTGATTTGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv     51 ATTTATGTGGATCAAAACGTATGTGATATATAAACTCGGCTTTGATTTGC    100

BSNT_04976___    101 AAATCGATACTCTGTTGGAGGAGCTAATGCTGCTGGTCAACCCGCTCAGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv    101 AAATCGATACTCTGTTGGAGGAGCTAATGCTGCTGGTCAACCCGCTCAGC    150

BSNT_04976___    151 TTTATTCTTCCTTTATTCGGGATCGGCCTGCTTCTGAAAGGAAACAAGCA    200
                     ||||||||||||||||||||||||||||||.||||.||||.|||||||||
BSU33360___yv    151 TTTATTCTTCCTTTATTCGGGATCGGCCTGTTTCTAAAAGAAAACAAGCA    200

BSNT_04976___    201 GCGGGCTTTTTTGCTGATTGCCAATTTGGTTCTGACTGTTATCTTGATCT    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv    201 GCGGGCCTTTTTGCTGATTGCCAATTTGGTTCTGACTGTTATCTTGATCT    250

BSNT_04976___    251 CTAATACGATTTTTTACGGCTTTTATATCGATTTTATTACCATTCCGGTT    300
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU33360___yv    251 CTAATACGATTTTTTACGGCTTTTATATCGATTTTATTACCATCCCGGTT    300

BSNT_04976___    301 TTATTTCAGGCGAGCAACATGAGCGATATGGGAAGCAGTGTAAAAGAATT    350
                     |||||||||||.||||||||||||||||||||.|||||||||||||||.|
BSU33360___yv    301 TTATTTCAGGCCAGCAACATGAGCGATATGGGCAGCAGTGTAAAAGAACT    350

BSNT_04976___    351 GTTCCATCCTCTGTTTATCGCCCTGTTTGTGGATTTGGTTTTTCTGCTGC    400
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU33360___yv    351 GTTCCATCCTCTGTTTATCGCCCTGTTTGTGGATTTGGTTTTTCTGCTGT    400

BSNT_04976___    401 TGTTCGCCAGAAAAACCAAACACCCACAGACAAAAGCCGCTCCCCGCACG    450
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU33360___yv    401 TGTTCGCCAGAAAAACCAAACACCCACAGACAAAAGCCGCTCCCCACACG    450

BSNT_04976___    451 ATCAAACGGTACTATGCAGCTTCCTGCGGCATGCTTTTATGCACACTGGC    500
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU33360___yv    451 ATCAAACGGTACTATGCAGCTTCCTGCGGAATGCTTTTATGCACACTGGC    500

BSNT_04976___    501 ACTTGCAGAAGTACAGCAGCCGAAGCTTTTGGCACATTCTTTTGACCGGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv    501 ACTTGCAGAAGTACAGCAGCCGAAGCTTTTGGCACATTCTTTTGACCGGG    550

BSNT_04976___    551 AAATGCTAGTCAAAAGCATCGGCCTGTTTCAGTTCCATATTTACGATACA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv    551 AAATGCTAGTCAAAAGCATCGGCCTGTTTCAGTTCCATATTTACGATACA    600

BSNT_04976___    601 ATTTCTCAGACTGTTAATATCAGCGCGAAAGCTTTTGCCGATGAAGACAG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv    601 ATTTCTCAGACTGTTAATATCAGCGCGAAAGCTTTTGCCGATGAAGACAG    650

BSNT_04976___    651 TATAACTGCCATTAAAAACTACACAGAGGCTGATTACAGCAAGCCTGATC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv    651 TATAACTGCCATTAAAAACTACACAGAGGCTGATTACAGCAAGCCTGATC    700

BSNT_04976___    701 AAAGCAAATTCGGTCTTGCAAAGGGGCGCAATGTCATCTTTGTAACACTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv    701 AAAGCAAATTCGGTCTTGCAAAGGGGCGCAATGTCATCTTTGTAACACTT    750

BSNT_04976___    751 GAATCGACCCAAAGCTTTGTTCTGAATGAAAAAGTAAATGGAAAAGAAAT    800
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv    751 GAGTCGACCCAAAGCTTTGTTCTGAATGAAAAAGTAAATGGAAAAGAAAT    800

BSNT_04976___    801 TACCCCATTTATGAATGATCTCATTAAAAAAAGCTATTCCTTTGATCATT    850
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU33360___yv    801 TACCCCATTTATGAATGATCTCATAAAAAAAAGCTATTCCTTTGATCATT    850

BSNT_04976___    851 TCTATCAGCAAACAGAACAAGGCAAAACATCAGATTCAGAATTTATCGTC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv    851 TCTATCAGCAAACAGAACAAGGCAAAACATCAGATTCAGAATTTATCGTC    900

BSNT_04976___    901 GCTAACTCACTGTATCCTTCCCTTAGCGGCGCCGTCTTTTTCACGAAAAG    950
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU33360___yv    901 GCTAACTCACTGTATCCCTCCCTTAGCGGCGCCGTCTTTTTCACGAAAAG    950

BSNT_04976___    951 CGACCATCAATTTTATACGATGTATAAATCGCTGAAGCAGCACGATTATT   1000
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU33360___yv    951 CGACCATCAATTTCATACGATGTATAAATCGCTGAAGCAGCACGATTATT   1000

BSNT_04976___   1001 ATTCAGCCGTCTTTCATGCTAACCATAAAACATTTTGGAACAGAGATGTC   1050
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU33360___yv   1001 ATTCAGCCGTCTTTCACGCTAACCATAAAACATTTTGGAACAGAGATGTC   1050

BSNT_04976___   1051 ATGTACGATACATTTGGCATTGACCGCTTTTTTGATGTTGATGATTTTCA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv   1051 ATGTACGATACATTTGGCATTGACCGCTTTTTTGATGTTGATGATTTTCA   1100

BSNT_04976___   1101 TGTCACTCCCGGGACATCGACAAGCTGGGGTTTAAAAGACAAAGAATTTT   1150
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU33360___yv   1101 TGTCACTCCCGGGACATCGACAAGCTGGGGCTTAAAAGACAAAGAATTTT   1150

BSNT_04976___   1151 TAGAGCAGTCCGCCGAAAAGCTGAAAAGCCTGCCGCAGCCGTTCTACAGC   1200
                     ||||||||||||||.||||||||||||||||.||||||||||||||||||
BSU33360___yv   1151 TAGAGCAGTCCGCCAAAAAGCTGAAAAGCCTACCGCAGCCGTTCTACAGC   1200

BSNT_04976___   1201 AGTTTTATCACGTTAACGAATCATTTTCCGTTTGAGATTGATGAAAAGGA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv   1201 AGTTTTATCACGTTAACGAATCATTTTCCGTTTGAGATTGATGAAAAGGA   1250

BSNT_04976___   1251 TCAGCTGATAGATGAATTCGATTCAAGCAGTGATCTGTTAAACCGCTATG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv   1251 TCAGCTGATAGATGAATTCGATTCAAGCAGTGATCTGTTAAACCGCTATG   1300

BSNT_04976___   1301 TGACCACGGTTCGCTATGAGGATGAGGCATTGAAGCATTTTATCAAAAAA   1350
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU33360___yv   1301 TGACCACGGTTCGCTATGAGGATGAAGCATTGAAGCATTTTATCAAAAAA   1350

BSNT_04976___   1351 CTGAAGGACGAAGGCTTATACGAAAATTCGATGATCGTATTTATGGGAGA   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv   1351 CTGAAGGACGAAGGCTTATACGAAAATTCGATGATCGTATTTATGGGAGA   1400

BSNT_04976___   1401 TCATTACGGCATTTCTGAAGCCCATAACGAGGCCATGGCTGAGTTTTTAA   1450
                     |||||||||||||||||||||||||||||||||.|||||||||||||||.
BSU33360___yv   1401 TCATTACGGCATTTCTGAAGCCCATAACGAGGCAATGGCTGAGTTTTTAG   1450

BSNT_04976___   1451 GGAAAGACGAAATCACACCGTATGACAACGTTCAGCTCCAGCGGGTGCCG   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv   1451 GGAAAGACGAAATCACACCGTATGACAACGTTCAGCTCCAGCGGGTGCCG   1500

BSNT_04976___   1501 TTTATCATACATATCCCGGGAATCACCGATCAACAGCCGGAAACCATCCC   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv   1501 TTTATCATACATATCCCGGGAATCACCGATCAACAGCCGGAAACCATCCC   1550

BSNT_04976___   1551 TGATGCCGGGGGACAGGTCGACGTCAGGCCGACGCTGATGCATTTGCTCG   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv   1551 TGATGCCGGGGGACAGGTCGACGTCAGGCCGACGCTGATGCATTTGCTCG   1600

BSNT_04976___   1601 GCGTTGAGACAAAAGGCGATATCCAATTCGGCAATGATTTGCTGTCGGGC   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv   1601 GCGTTGAGACAAAAGGCGATATCCAATTCGGCAATGATTTGCTGTCGGGC   1650

BSNT_04976___   1651 GACCGCACCCCATTCGCCGTTCTGCGAAACGGCAGCTTTATTACGAACGA   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv   1651 GACCGCACCCCATTCGCCGTTCTGCGAAACGGCAGCTTTATTACGAACGA   1700

BSNT_04976___   1701 TTATATATACACAAAGAACACGTGCTATAGCCAAAAAACAGGTGAAGTGC   1750
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv   1701 TTATGTATACACAAAGAACACGTGCTATAGCCAAAAAACAGGTGAAGTGC   1750

BSNT_04976___   1751 TGGAAGATCAGGATGCGTGCCTCCCTTACAAGGAGAAAGCAAACGAAGAA   1800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv   1751 TGGAAGATCAGGATGCGTGCCTCCCTTACAAGGAGAAAGCAAACGAAGAA   1800

BSNT_04976___   1801 CTTTCTCTCTCTGATAAAATTTTAAATGGTGACCTGCTCAGGTTTTCCGA   1850
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU33360___yv   1801 CTGTCTCTCTCTGATAAAATTTTAAATGGTGACCTGCTCAGGTTTTCCGA   1850

BSNT_04976___   1851 ATGA   1854
                     ||||
BSU33360___yv   1851 ATGA   1854


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