Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05002 and BSU33500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:35
# Commandline: needle
# -asequence dna-align/BSNT_05002___yvgX.1.22522.seq
# -bsequence dna-align/BSU33500___copA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05002___yvgX-BSU33500___copA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05002___yvgX-BSU33500___copA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05002___yvgX
# 2: BSU33500___copA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2415
# Identity: 2376/2415 (98.4%)
# Similarity: 2376/2415 (98.4%)
# Gaps: 6/2415 ( 0.2%)
# Score: 11737.0
#
#
#=======================================
BSNT_05002___ 1 ATGTTGAGTGAACAAAAGGAAATCGCGATGCAGGTCTCTGGTATGACCTG 50
|||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 1 ---TTGAGTGAACAAAAGGAAATCGCGATGCAGGTCTCTGGTATGACCTG 47
BSNT_05002___ 51 TGCGGCATGTGCTGCCAGAATTGAAAAAGGCCTGAAGCGGATGCCCGGTG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 48 TGCGGCATGTGCTGCCAGAATTGAAAAAGGCCTGAAGCGGATGCCCGGTG 97
BSNT_05002___ 101 TCACGGATGCAAATGTTAATCTGGCAACGGAAACATCAAATGTAATCTAC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 98 TCACGGATGCAAATGTTAATCTGGCAACGGAAACATCAAATGTAATCTAC 147
BSNT_05002___ 151 GATCCTGCTGAAACAGGGACTGCAGCGATTCAAGAAAAAATAGAAAAGCT 200
||||||||||||||||||||||||||||||||.|||||||||||.|||||
BSU33500___co 148 GATCCTGCTGAAACAGGGACTGCAGCGATTCAGGAAAAAATAGAGAAGCT 197
BSNT_05002___ 201 GGGCTATCACGTTGTTACAGAAAAAGCTGAATTCGATATTGAAGGCATGA 250
||||||||||||.|||||||||||||||||||||||||||||.|||||||
BSU33500___co 198 GGGCTATCACGTCGTTACAGAAAAAGCTGAATTCGATATTGAGGGCATGA 247
BSNT_05002___ 251 CCTGTGCGGCTTGCGCCAATCGGATTGAAAAACGGCTTAACAAAATAGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 248 CCTGTGCGGCTTGCGCCAATCGGATTGAAAAACGGCTTAACAAAATAGAA 297
BSNT_05002___ 301 GGCGTCGCAAATGCACCAGTAAACTTCGCTTTAGAAACAGTTACGGTCGA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 298 GGCGTCGCAAATGCACCAGTAAACTTCGCTTTAGAAACAGTTACGGTCGA 347
BSNT_05002___ 351 ATACAATCCAAAAGAAGCGTCTGTCGGCGATTTGAAAGAAGCGGTAGATA 400
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU33500___co 348 ATACAATCCAAAAGAAGCGTCTGTCAGCGATTTGAAAGAAGCGGTAGATA 397
BSNT_05002___ 401 AGCTTGGATATAAGCTAAAGTTGAAGGGGGAACAGGACAGTGAGGCTGCT 450
||||||||||||||||||||||||||||.||||||||||||||| |||
BSU33500___co 398 AGCTTGGATATAAGCTAAAGTTGAAGGGTGAACAGGACAGTGAG---GCT 444
BSNT_05002___ 451 GCTGCTAAAAAGAAAGAAGAACGGAAGCAAACAGCGAGACTGATTTTTTC 500
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU33500___co 445 GCTGCTAAAAAGAAAGAAGAACGGAAGCAAACGGCGAGACTGATTTTTTC 494
BSNT_05002___ 501 AGCTGTCCTGTCATTTCCATTGCTTTGGGCGATGGTGAGCCATTTTACAT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 495 AGCTGTCCTGTCATTTCCATTGCTTTGGGCGATGGTGAGCCATTTTACAT 544
BSNT_05002___ 551 TTACATCATTCATTTGGGTACCCGATATATTTCTCAATCCGTGGATGCAA 600
||||||||||||||||||||||.||||||||||||||||||||||||||.
BSU33500___co 545 TTACATCATTCATTTGGGTACCGGATATATTTCTCAATCCGTGGATGCAG 594
BSNT_05002___ 601 TTTGCGCTGGCGACACCAGTCCAATTTCTGATCGGCTGGCCGTTTTATGT 650
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU33500___co 595 TTTGCGCTGGCGACACCAGTCCAGTTTCTGATCGGCTGGCCGTTTTATGT 644
BSNT_05002___ 651 GGGTGCGTATAAGGCGCTCAGAAATAAAAGCGCCAATATGGATGTATTGG 700
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU33500___co 645 GGGTGCGTATAAGGCGCTTAGAAATAAAAGCGCCAATATGGATGTATTGG 694
BSNT_05002___ 701 TCGCCCTCGGTACGACGGCTGCTTACGCTTATAGTCTTTATCTTACTTTT 750
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU33500___co 695 TCGCCCTCGGTACGACGGCTGCTTACGCTTATAGTCTTTATCTAACTTTT 744
BSNT_05002___ 751 CAAAGTCTTGGATCTCACGGGCATACAGACGGCCTTTACTATGAAACAAG 800
|||||..||||.||||||||||||||||||||||||||.|||||||||||
BSU33500___co 745 CAAAGCATTGGCTCTCACGGGCATACAGACGGCCTTTATTATGAAACAAG 794
BSNT_05002___ 801 CGCGATTTTGCTGACGCTGATTTTATTAGGCAAGTTGTTTGAAACAAAAG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 795 CGCGATTTTGCTGACGCTGATTTTATTAGGCAAGTTGTTTGAAACAAAAG 844
BSNT_05002___ 851 CAAAAGGCCGTTCCTCGGATGCGATTAAAAAGCTGATGAAGCTTCAAGCG 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 845 CAAAAGGCCGTTCCTCGGATGCGATTAAAAAGCTGATGAAGCTTCAAGCG 894
BSNT_05002___ 901 AAAACAGCGACTGTTGTAAGAGACGGACAGGAGCAAATCATCCCGATCGA 950
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU33500___co 895 AAAACAGCTACTGTTGTAAGAGACGGACAGGAGCAAATCATCCCGATCGA 944
BSNT_05002___ 951 TGAAGTGCTTGTTAATGACATTGTTTACGTCAAACCCGGCGAACGAATTC 1000
.|||||||||||||||||||||||||||||||||||.|||||||||||||
BSU33500___co 945 CGAAGTGCTTGTTAATGACATTGTTTACGTCAAACCTGGCGAACGAATTC 994
BSNT_05002___ 1001 CTGTCGACGGAGAAGTGGTTGAAGGCCGTTCAGCGGTTGACGAATCGATG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 995 CTGTCGACGGAGAAGTGGTTGAAGGCCGTTCAGCGGTTGACGAATCGATG 1044
BSNT_05002___ 1051 ATTACAGGAGAAAGTCTTCCTGTTGACAAAAATCCTGGTGACAGCGTGAC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 1045 ATTACAGGAGAAAGTCTTCCTGTTGACAAAAATCCTGGTGACAGCGTGAC 1094
BSNT_05002___ 1101 AGGTTCAACCGTTAACGCAAACGGCTTTCTGAAAATTAAAGCTGTCAACG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 1095 AGGTTCAACCGTTAACGCAAACGGCTTTCTGAAAATTAAAGCTGTCAACG 1144
BSNT_05002___ 1151 TCGGAAAGGATACTGCGCTTTCTCATATCATCAAAATTGTTGAGGAAGCA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 1145 TCGGAAAGGATACTGCGCTTTCTCATATCATCAAAATTGTTGAGGAAGCA 1194
BSNT_05002___ 1201 CAAGGGTCAAAAGCGCCGATCCAGCGTCTCGCTGACCAGATTTCAGGCAT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 1195 CAAGGGTCAAAAGCGCCGATCCAGCGTCTCGCTGACCAGATTTCAGGCAT 1244
BSNT_05002___ 1251 TTTTGTACCCATTGTATTGGGGATTGCCGTTCTCACTTTTCTCATTTGGT 1300
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU33500___co 1245 TTTTGTACCCATTGTATTGGGGATTGCGGTTCTCACTTTTCTCATTTGGT 1294
BSNT_05002___ 1301 ACCTTTGGGCGGCTCCTGGCGATTTTGCTGAAGCGATCAGCAAGTTCATT 1350
|.||||||||||||||||||||||||||.|||||||||||||||||||||
BSU33500___co 1295 ATCTTTGGGCGGCTCCTGGCGATTTTGCCGAAGCGATCAGCAAGTTCATT 1344
BSNT_05002___ 1351 GCGGTTCTTGTCATTGCCTGTCCTTGCGCCCTCGGTCTTGCCACTCCGAC 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 1345 GCGGTTCTTGTCATTGCCTGTCCTTGCGCCCTCGGTCTTGCCACTCCGAC 1394
BSNT_05002___ 1401 GAGCATAATGGCTGGATCTGGACGCGCTGCTGAATTCGGGATTTTATTTA 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 1395 GAGCATAATGGCTGGATCTGGACGCGCTGCTGAATTCGGGATTTTATTTA 1444
BSNT_05002___ 1451 AAGGCGGCGAGCATTTAGAAAAAACACATCGTCTCGATACCATTGTTCTT 1500
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU33500___co 1445 AAGGCGGCGAGCATTTAGAAAAAACACATCGTCTCGATACAATTGTTCTT 1494
BSNT_05002___ 1501 GATAAAACCGGAACCGTGACAAACGGGAAGCCGCGTCTGACAGATGCCAT 1550
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU33500___co 1495 GATAAAACCGGAACCGTGACAAACGGGAAGCCGCGTCTGACGGATGCCAT 1544
BSNT_05002___ 1551 TCCATTCGGCCATTTTGAAGAAAAAGATTTGCTTCAATTTGCAGCGGCAG 1600
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU33500___co 1545 TCCATTCGGCCGTTTTGAAGAAAAAGATTTGCTTCAATTTGCAGCGGCAG 1594
BSNT_05002___ 1601 CGGAAACGGGATCAGAGCATCCGCTTGGCGAAGCGATTATTGCTGGCGTG 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 1595 CGGAAACGGGATCAGAGCATCCGCTTGGCGAAGCGATTATTGCTGGCGTG 1644
BSNT_05002___ 1651 AAAGATAAAGGGCTTGAGATACCGAAACTTACCCGCTTTGAAGCAAAAGT 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 1645 AAAGATAAAGGGCTTGAGATACCGAAACTTACCCGCTTTGAAGCAAAAGT 1694
BSNT_05002___ 1701 CGGCGCAGGCATTTTGGCTGAAGCCGGAGGAAAAAGCATTCTCGTCGGCA 1750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 1695 CGGCGCAGGCATTTTGGCTGAAGCCGGAGGAAAAAGCATTCTCGTCGGCA 1744
BSNT_05002___ 1751 CAAGAAAATTAATGGAGAGCGAACAGGTTGAGCATGGGGCTCTTCTCGCC 1800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 1745 CAAGAAAATTAATGGAGAGCGAACAGGTTGAGCATGGGGCTCTTCTCGCC 1794
BSNT_05002___ 1801 CAAATGGAAGAGCTAGAGGCCGAAGGGAAAACAGTTATGCTTGTATCCAT 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 1795 CAAATGGAAGAGCTAGAGGCCGAAGGGAAAACAGTTATGCTTGTATCCAT 1844
BSNT_05002___ 1851 TGATGGAGAAGCAGCGGGGCTAGTAGCAGTTGCAGATACGATTAAGGATA 1900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 1845 TGATGGAGAAGCAGCGGGGCTAGTAGCAGTTGCAGATACGATTAAGGATA 1894
BSNT_05002___ 1901 CGTCGCGGAAGGCTGTTGCCCGTCTGAAAGAGTTGGGTCTTGATGTCATC 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 1895 CGTCGCGGAAGGCTGTTGCCCGTCTGAAAGAGTTGGGTCTTGATGTCATC 1944
BSNT_05002___ 1951 ATGATGACAGGAGACAATCGCAGAACCGCAGAAGCCATTGCGAAGGAAGC 2000
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU33500___co 1945 ATGATGACAGGAGACAATCGCAGAACCGCAGAAGCCATCGCGAAGGAAGC 1994
BSNT_05002___ 2001 GGGAATTGCGAATATCATTGCGGAAGTCCTTCCTGAACAAAAAGCGGCGG 2050
|||||||||||||||||||||||||||.||||||||||||||.|||||||
BSU33500___co 1995 GGGAATTGCGAATATCATTGCGGAAGTTCTTCCTGAACAAAAGGCGGCGG 2044
BSNT_05002___ 2051 AAATCGCCCGCTTGCAAAAAGAAGGCCGCCAGACAGCAATGGTAGGCGAC 2100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 2045 AAATCGCCCGCTTGCAAAAAGAAGGCCGCCAGACAGCAATGGTAGGCGAC 2094
BSNT_05002___ 2101 GGAATTAACGATGCGCCGGCGCTTGCCACAGCTGACATCGGCATGGCGAT 2150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 2095 GGAATTAACGATGCGCCGGCGCTTGCCACAGCTGACATCGGCATGGCGAT 2144
BSNT_05002___ 2151 TGGAACTGGCACGGACATTGCCATGGAAACAGCAGACATTACACTGATTC 2200
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU33500___co 2145 TGGAACTGGCACGGACATTGCCATGGAAACAGCAGACATTACACTTATTC 2194
BSNT_05002___ 2201 GCGGCGATCTAAACAGCATTGCAGACGCAATCCGCATGAGTAGATTGACA 2250
||||||||||.|||||||||||.|||||||||||||||||.|||||||||
BSU33500___co 2195 GCGGCGATCTGAACAGCATTGCCGACGCAATCCGCATGAGCAGATTGACA 2244
BSNT_05002___ 2251 ATGAAAAACATTAAACAAAACTTATTCTGGGCGCTTGGCTATAACAGCCT 2300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 2245 ATGAAAAACATTAAACAAAACTTATTCTGGGCGCTTGGCTATAACAGCCT 2294
BSNT_05002___ 2301 CGGCATCCCAATCGCAGCACTTGGATTTTTAGCACCGTGGATAGCAGGAG 2350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33500___co 2295 CGGCATCCCAATCGCAGCACTTGGATTTTTAGCACCGTGGATAGCAGGAG 2344
BSNT_05002___ 2351 CAGCAATGGCATTCAGCTCCGTTTCCGTTGTTCTGAATGCTCTTCGCCTG 2400
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU33500___co 2345 CAGCAATGGCATTCAGCTCCGTTTCCGTTGTTCTGAATGCTCTTCGTCTG 2394
BSNT_05002___ 2401 CAAAAAGTAAAATGA 2415
|||||||||||||||
BSU33500___co 2395 CAAAAAGTAAAATGA 2409
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