Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05005 and BSU33530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:36
# Commandline: needle
# -asequence dna-align/BSNT_05005___yvaA.1.22522.seq
# -bsequence dna-align/BSU33530___yvaA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05005___yvaA-BSU33530___yvaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05005___yvaA-BSU33530___yvaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05005___yvaA
# 2: BSU33530___yvaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1077
# Identity: 1056/1077 (98.1%)
# Similarity: 1056/1077 (98.1%)
# Gaps: 0/1077 ( 0.0%)
# Score: 5196.0
#
#
#=======================================
BSNT_05005___ 1 TTGATAACGCTTTTAAAGGGGAGAAGAAAAGTGGATACGATCAAGGTTGG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33530___yv 1 TTGATAACGCTTTTAAAGGGGAGAAGAAAAGTGGATACGATCAAGGTTGG 50
BSNT_05005___ 51 AATATTAGGATACGGATTGTCCGGTTCTGTTTTTCACGGGCCGCTGCTGG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33530___yv 51 AATATTAGGATACGGATTGTCCGGTTCTGTTTTTCACGGGCCGCTGCTGG 100
BSNT_05005___ 101 ATGTTCTGGATGAATATCAAATCAGCAAAATCATGACATCTCGGACAGAA 150
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU33530___yv 101 ATGTTCTGGATGAATATCAAATCAGCAAAATCATGACATCACGGACAGAA 150
BSNT_05005___ 151 GAAGTGAAACGGGACTTTCCAGATGCTGAGGTTGTACATGAGCTTGAGGA 200
||||||||||||||.||||||||||||||||||||||||||||||||.||
BSU33530___yv 151 GAAGTGAAACGGGATTTTCCAGATGCTGAGGTTGTACATGAGCTTGAAGA 200
BSNT_05005___ 201 AATCACAAATGACCCTGCCATTGAGCTTGTCATTGTCACCACCCCGAGCG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33530___yv 201 AATCACAAATGACCCTGCCATTGAGCTTGTCATTGTCACCACCCCGAGCG 250
BSNT_05005___ 251 GCCTTCATTACGAGCATGCTATGGCATGCATACAGGCCGGAAAACATGTT 300
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU33530___yv 251 GCCTTCATTACGAGCATACTATGGCATGCATACAGGCCGGAAAACATGTT 300
BSNT_05005___ 301 GTGATGGAAAAACCAATGACAGCAACAGCCGAAGAGGGGGAAACATTAAA 350
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU33530___yv 301 GTGATGGAAAAACCAATGACAGCAACGGCCGAAGAGGGGGAAACATTAAA 350
BSNT_05005___ 351 AAGGGCTGCCGATGAAAAAGGCGTATTATTAAGCGTATATCATAACCGAC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33530___yv 351 AAGGGCTGCCGATGAAAAAGGCGTATTATTAAGCGTATATCATAACCGAC 400
BSNT_05005___ 401 GCTGGGATAACGACTTTTTAACGATTAAAAAGCTGATCTCTGAGGGATCT 450
|||||||||||||.|||||||||||||||||||||||||||||||||||.
BSU33530___yv 401 GCTGGGATAACGATTTTTTAACGATTAAAAAGCTGATCTCTGAGGGATCC 450
BSNT_05005___ 451 CTTGAAGATATCAATACATATCAAGTTTCCTATGACCGCTACAGACCTGA 500
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU33530___yv 451 CTTGAAGATATCAATACATATCAAGTTTCCTATAACCGCTACAGACCTGA 500
BSNT_05005___ 501 AGTTCAAGCGCGGTGGCGGGAAAAAGAAGGCATTGCCACTGGTACGCTGT 550
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU33530___yv 501 AGTTCAAGCGCGGTGGCGGGAAAAAGAAGGCACTGCCACTGGTACGCTGT 550
BSNT_05005___ 551 ATGATCTCGGCTCCCACATCATAGACCAAACCCTGCATTTGTTTGGGATG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33530___yv 551 ATGATCTCGGCTCCCACATCATAGACCAAACCCTGCATTTGTTTGGGATG 600
BSNT_05005___ 601 CCTAAAGCCGTGACTGCAAACGTGATGGCCCAGCGGGAAAATGCCGAAAC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33530___yv 601 CCTAAAGCCGTGACTGCAAACGTGATGGCCCAGCGGGAAAATGCCGAAAC 650
BSNT_05005___ 651 GGTTGACTATTTTCATTTAACCCTGGACTATGGCAAGCTTCAAGCCATTC 700
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU33530___yv 651 GGTTGACTATTTTCATTTAACCCTGGATTATGGCAAGCTTCAAGCCATTC 700
BSNT_05005___ 701 TATACGGGGGATCAATCGTTCCGGCAAACGGACCTCGTTATCAAATCCAT 750
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU33530___yv 701 TATACGGAGGATCAATCGTTCCGGCAAACGGACCTCGTTATCAAATCCAT 750
BSNT_05005___ 751 GGAAAAGATTCCAGCTTTATCAAATACGGAATTGACGGACAGGAAGACGC 800
|||||||||||.||||||||||||||.|||||||||||||||||||||||
BSU33530___yv 751 GGAAAAGATTCTAGCTTTATCAAATATGGAATTGACGGACAGGAAGACGC 800
BSNT_05005___ 801 ACTCAGAGCGGGAAGAAAACCAGAGGATGACAGCTGGGGTGCAGATGATC 850
||||||||||||||||||||||||||||||||||||||||||.||||.||
BSU33530___yv 801 ACTCAGAGCGGGAAGAAAACCAGAGGATGACAGCTGGGGTGCGGATGTTC 850
BSNT_05005___ 851 CGGAGTTTTACGGACAGCTTACAACCATTCGTGGCTCCGGCAAAAAAACA 900
||||||||||||||.||||||||||||||||||||||||.||||||||||
BSU33530___yv 851 CGGAGTTTTACGGAAAGCTTACAACCATTCGTGGCTCCGACAAAAAAACA 900
BSNT_05005___ 901 GAAACGATCCCATCAGTAAATGGCTCCTACCTTACTTATTACCGCAAAAT 950
||||||||.|||||||||||||||||||||||||||||||||||.|||||
BSU33530___yv 901 GAAACGATTCCATCAGTAAATGGCTCCTACCTTACTTATTACCGTAAAAT 950
BSNT_05005___ 951 AGCGGAAAGCATACGGGAAGGTGCTGCGCTGCCAGTCACTGCTGAGGAAG 1000
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU33530___yv 951 AGCGGAAAGCATACGAGAAGGTGCTGCGCTGCCAGTCACTGCTGAGGAAG 1000
BSNT_05005___ 1001 GTATTAATGTCATCCGCATCATTGAAGCCGCGATGAAAAGCAGTAAAGAG 1050
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU33530___yv 1001 GTATTAATGTCATCCGCATCATTGAAGCCGCGATGGAAAGCAGTAAAGAG 1050
BSNT_05005___ 1051 AAACGAACCATTATGCTGGAGCACTAA 1077
|||||||||||||||||||||||||||
BSU33530___yv 1051 AAACGAACCATTATGCTGGAGCACTAA 1077
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