Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05107 and BSU33700

See Amino acid alignment / Visit BSNT_05107 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:39
# Commandline: needle
#    -asequence dna-align/BSNT_05107___opuBD.1.22522.seq
#    -bsequence dna-align/BSU33700___opuBD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05107___opuBD-BSU33700___opuBD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05107___opuBD-BSU33700___opuBD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05107___opuBD
# 2: BSU33700___opuBD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 681
# Identity:     672/681 (98.7%)
# Similarity:   672/681 (98.7%)
# Gaps:           0/681 ( 0.0%)
# Score: 3324.0
# 
#
#=======================================

BSNT_05107___      1 ATGAACGTGCTTGAACAGTTAATGACGTATTACGCGCAGAATGGCAGTTA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33700___op      1 ATGAACGTGCTTGAACAGTTAATGACGTATTACGCGCAGAATGGCAGTTA     50

BSNT_05107___     51 CGTCATGGATGAATTCGGCCGCCACTTTCTCATGTCGGCTTACGGCGTAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU33700___op     51 CGTCATGGATGAATTCGGCCGCCACTTTCTCATGTCGGCTTACGGCGTTT    100

BSNT_05107___    101 TGTGTGCCGCTGTCGTCGGGGTTCCGGCCGGAATCCTCATCGCGCATTTT    150
                     |.|.||||||||||||||||||||||||||||||||||||||||||||||
BSU33700___op    101 TATTTGCCGCTGTCGTCGGGGTTCCGGCCGGAATCCTCATCGCGCATTTT    150

BSNT_05107___    151 CGCCGTTTGTCAGCCTGGGTGTTTGCCGTAACAAACGTTATTCAAACAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33700___op    151 CGCCGTTTGTCAGCCTGGGTGTTTGCCGTAACAAACGTTATTCAAACAAT    200

BSNT_05107___    201 CCCGGCGCTCGCTATGCTGGCCGTCTTAATGCTTGTTATGGGGCTCGGCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33700___op    201 CCCGGCGCTCGCTATGCTGGCCGTCTTAATGCTTGTTATGGGGCTCGGCG    250

BSNT_05107___    251 CAAATACCGTGATTCTATCATTATTTCTGTATTCCCTGCTGCCGATTATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33700___op    251 CAAATACCGTGATTCTATCATTATTTCTGTATTCCCTGCTGCCGATTATT    300

BSNT_05107___    301 CGAAACACGTACACAGGCATTATCAGTATTGAACATGCCTACTTAGAATC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33700___op    301 CGAAACACGTACACAGGCATTATCAGTATTGAACATGCCTACTTAGAATC    350

BSNT_05107___    351 GGGAAAAGCAATGGGCATGACGAAATTCCAAGTGCTCAGAATGGTTGAGC    400
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU33700___op    351 TGGAAAAGCAATGGGCATGACGAAATTCCAAGTGCTCAGAATGGTTGAGC    400

BSNT_05107___    401 TCCCGCTCGCACTTTCTGTCATTATGGCGGGCCTTCGCACGGCTCTCGTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33700___op    401 TCCCGCTCGCACTTTCTGTCATTATGGCGGGCCTTCGCACGGCTCTCGTC    450

BSNT_05107___    451 ATTGCCATTGGAATTACAGCGATCGGCACATTTGTCGGTGCCGGAGGCCT    500
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU33700___op    451 ATTGCCATCGGAATTACAGCGATCGGCACATTTGTCGGTGCCGGAGGCCT    500

BSNT_05107___    501 TGGGGACATGATTGTCCGCGGCTCAAACGCAACAAACGGAACTGCGATTA    550
                     ||||||||||||.||.||||||||||||||||||||||||||||||||||
BSU33700___op    501 TGGGGACATGATCGTACGCGGCTCAAACGCAACAAACGGAACTGCGATTA    550

BSNT_05107___    551 TTCTAGCCGGAGCGATACCAACTGCGGTGATGGCGGTAGGGGCGGATTTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33700___op    551 TTCTAGCCGGAGCGATACCAACTGCGGTGATGGCGGTAGGGGCGGATTTG    600

BSNT_05107___    601 CTCATGGCCTGGCTGGAGCGGGCATTAAGTCCGGTGAAGAAAAAAAGAAC    650
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU33700___op    601 CTCATGGCTTGGCTGGAGCGGGCATTAAGTCCGGTGAAGAAAAAAAGAAC    650

BSNT_05107___    651 CGGGGCGAAACACGTTCAATCAGCTGCATAG    681
                     ||||||||||||.||||||||||||||||||
BSU33700___op    651 CGGGGCGAAACATGTTCAATCAGCTGCATAG    681


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