Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05108 and BSU33710

See Amino acid alignment / Visit BSNT_05108 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:39
# Commandline: needle
#    -asequence dna-align/BSNT_05108___opuBC.1.22522.seq
#    -bsequence dna-align/BSU33710___opuBC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05108___opuBC-BSU33710___opuBC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05108___opuBC-BSU33710___opuBC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05108___opuBC
# 2: BSU33710___opuBC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 921
# Identity:     913/921 (99.1%)
# Similarity:   913/921 (99.1%)
# Gaps:           0/921 ( 0.0%)
# Score: 4533.0
# 
#
#=======================================

BSNT_05108___      1 ATGAAAAGAAAATATCTCAAATTAATGATAGGTTTAGTACTTGCGGCAAC     50
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU33710___op      1 ATGAAAAGAAAATATCTCAAATTAATGATAGGTTTAGCACTTGCGGCAAC     50

BSNT_05108___     51 GCTGACGCTGAGCGGCTGTTCGCTTCCTGGTCTCAGCGCTGCTGCAGACC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33710___op     51 GCTGACGCTGAGCGGCTGTTCGCTTCCTGGTCTCAGCGCTGCTGCAGACC    100

BSNT_05108___    101 AGACCATTAAAATCGGCGCGCAAAGCATGAGCGAATCAGAAATCATCGCC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33710___op    101 AGACCATTAAAATCGGCGCGCAAAGCATGAGCGAATCAGAAATCATCGCC    150

BSNT_05108___    151 AGCATGCTTGGCCAGTTGATCGAACACCATACTGATCTCAAAACAACAAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33710___op    151 AGCATGCTTGGCCAGTTGATCGAACACCATACTGATCTCAAAACAACAAC    200

BSNT_05108___    201 GATTAAAAATCTTGGCTCCAACGCGGTGCAGCAGCAGGCTTTAATGAACG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33710___op    201 GATTAAAAATCTTGGCTCCAACGCGGTGCAGCAGCAGGCTTTAATGAACG    250

BSNT_05108___    251 GGGAAATTGACATTGCGGCCACAAGATATACGGGAGACGCGCTGACAGGC    300
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU33710___op    251 GGGAAATCGACATTGCGGCCACAAGATATACGGGAGACGCGCTGACAGGC    300

BSNT_05108___    301 ACGTTGAGAATGGAACCTGAAAAAGATCCGGACAAAGCGCTGGCGCTTAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33710___op    301 ACGTTGAGAATGGAACCTGAAAAAGATCCGGACAAAGCGCTGGCGCTTAC    350

BSNT_05108___    351 TCAGCGGGAGTTTAAAAAAAGATACAATTTAAAATGGTATAACTCCTACG    400
                     ||||||||||||||||||||||||..|||||||.||||||.|||||||||
BSU33710___op    351 TCAGCGGGAGTTTAAAAAAAGATATGATTTAAAGTGGTATGACTCCTACG    400

BSNT_05108___    401 GGTTTGATAATACATATGCCTTTACAGTCAGCAGGGAGCTGGCCGACCAA    450
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU33710___op    401 GGTTTGATAATACATATGCCTTTACAGTCAGCAAGGAGCTGGCCGACCAA    450

BSNT_05108___    451 TACCATTTAGAGACCGTATCAGACGTTAAAAAATGGGCGCCGCAATTAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33710___op    451 TACCATTTAGAGACCGTATCAGACGTTAAAAAATGGGCGCCGCAATTAAA    500

BSNT_05108___    501 GCTGGGCGTTGATAACTATTGGATGAAGCTCAAAGGAAACGGCTATCAGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33710___op    501 GCTGGGCGTTGATAACTATTGGATGAAGCTCAAAGGAAACGGCTATCAGG    550

BSNT_05108___    551 ATTTTACGAAAACCTACGGCATGACATTCGGCGGCACGTATCCGATGCAG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33710___op    551 ATTTTACGAAAACCTACGGCATGACATTCGGCGGCACGTATCCGATGCAG    600

BSNT_05108___    601 ATCGGCCTTGTGTACGACGCGGTGAAAAGCGGAAAAATGGACATTGTGCT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33710___op    601 ATCGGCCTTGTGTACGACGCGGTGAAAAGCGGAAAAATGGACATTGTGCT    650

BSNT_05108___    651 TGCGTATTCAACCGATGGAAGAATCAAGTCCTATGGTCTCAAAATGCTAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33710___op    651 TGCGTATTCAACCGATGGAAGAATCAAGTCCTATGGTCTCAAAATGCTAA    700

BSNT_05108___    701 AGGATGATAAACAATTTTTCCCGCCGTACGACTGCTCTCCGGTTGTTCCG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33710___op    701 AGGATGATAAACAATTTTTCCCGCCGTACGACTGCTCTCCGGTTGTTCCG    750

BSNT_05108___    751 GAAAAGGTGCTCAAAGAACATCCTGAGCTTGAAGGCATCATCAAGAAAAT    800
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU33710___op    751 GAAAAGGTGCTCAAAGAACATCCTGAACTTGAAGGCATCATCAAGAAAAT    800

BSNT_05108___    801 GCTCGGAAAAATCGACACAGCCACGATGCAGGAGCTTAACTATGAAGTCG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33710___op    801 GCTCGGAAAAATCGACACAGCCACGATGCAGGAGCTTAACTATGAAGTCG    850

BSNT_05108___    851 ACGGCAATCTCAAAGAACCGTCTGTCGTTGCCAAGGAATATTTAGAAAAA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33710___op    851 ACGGCAATCTCAAAGAACCGTCTGTCGTTGCCAAGGAATATTTAGAAAAA    900

BSNT_05108___    901 CATCGCTATTTCGAATCGTGA    921
                     |||||||||||||||||||||
BSU33710___op    901 CATCGCTATTTCGAATCGTGA    921


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