Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05112 and BSU33740

See Amino acid alignment / Visit BSNT_05112 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:40
# Commandline: needle
#    -asequence dna-align/BSNT_05112___yvaV.1.22522.seq
#    -bsequence dna-align/BSU33740___yvaV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05112___yvaV-BSU33740___yvaV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05112___yvaV-BSU33740___yvaV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05112___yvaV
# 2: BSU33740___yvaV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 534
# Identity:     524/534 (98.1%)
# Similarity:   524/534 (98.1%)
# Gaps:           0/534 ( 0.0%)
# Score: 2580.0
# 
#
#=======================================

BSNT_05112___      1 TTGGAGAAAGATCCGTTAACGATCATTGAACAAGCCGAGGACCATTTTAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33740___yv      1 TTGGAGAAAGATCCGTTAACGATCATTGAACAAGCCGAGGACCATTTTAT     50

BSNT_05112___     51 AGAAAAAATCGCGGAAAACATGCATGCATTTGGAATGCCCTCTACCGTCG    100
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU33740___yv     51 AGAAAGAATCGCGGAAAACATGCATGCATTTGGAATGCCCTCTACCGTCG    100

BSNT_05112___    101 GACGTGTGCTGGGCATTATTTATATGAATCGAAAACCGATGACGCTTACG    150
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU33740___yv    101 GACGAGTGCTGGGCATTATTTATATGAATCGAAAACCGATGACGCTTACG    150

BSNT_05112___    151 GAATTATCTGAGGCCACCGGCATGAGCAAAACACGCATGAGCCAGGTAGT    200
                     ||||||||||||||||||||||||||.||||||||.||||||||||||||
BSU33740___yv    151 GAATTATCTGAGGCCACCGGCATGAGTAAAACACGTATGAGCCAGGTAGT    200

BSNT_05112___    201 GCGGGAAATGCTTGATGCCAACATTGCCGAGAAGGTGTTCGAAAAAGGCG    250
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU33740___yv    201 GCGGGAAATGCTTGATGCCAACATTGCCGAGAAGGTATTCGAAAAAGGCG    250

BSNT_05112___    251 TGCGAAAAGATTTATATGAGGTTGAGCAGGACTACTATCAAACATTTATC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33740___yv    251 TGCGAAAAGATTTATATGAGGTTGAGCAGGACTACTATCAAACATTTATC    300

BSNT_05112___    301 ACGCTGTTTTCTGCCACCTGGAGCAAAGTCGTCAGCAAAAACAAAATGAT    350
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU33740___yv    301 ACGCTGTTTTCAGCCACCTGGAGCAAAGTCGTCAGCAAAAACAAAATGAT    350

BSNT_05112___    351 GCATAAAAAACTCAATCGGGAGCTGCTTAGCGTGTTGGATGAAGAGCTTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33740___yv    351 GCATAAAAAACTCAATCGGGAGCTGCTTAGCGTGTTGGATGAAGAGCTTA    400

BSNT_05112___    401 CTCCTGAAGCGGAAGAAAAAGTGAATGAACTGCTGAAAGAATTAAAGGAA    450
                     ||||||||||||||||||||||||||||.||||||||.||||||||||||
BSU33740___yv    401 CTCCTGAAGCGGAAGAAAAAGTGAATGAGCTGCTGAAGGAATTAAAGGAA    450

BSNT_05112___    451 TGGCTTGATTATTATAATTGGCTCAGCCGTTTGATTGAGTTTTTTGAGAG    500
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU33740___yv    451 TGGCTCGATTATTATAATTGGCTCAGCCGTTTGATTGAGTTTTTTGAGAG    500

BSNT_05112___    501 CGAAGAAATTTTTAAATATGTGCCGAAGCCGTAA    534
                     ||||||.|||||||||||||||||||||||||||
BSU33740___yv    501 CGAAGACATTTTTAAATATGTGCCGAAGCCGTAA    534


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