Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05121 and BSU33860

See Amino acid alignment / Visit BSNT_05121 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence dna-align/BSNT_05121___yvbH.1.22522.seq
#    -bsequence dna-align/BSU33860___yvbH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05121___yvbH-BSU33860___yvbH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05121___yvbH-BSU33860___yvbH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05121___yvbH
# 2: BSU33860___yvbH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 615
# Identity:     611/615 (99.3%)
# Similarity:   611/615 (99.3%)
# Gaps:           0/615 ( 0.0%)
# Score: 3039.0
# 
#
#=======================================

BSNT_05121___      1 ATGTTCAAAAAAATTGCGGCAGATGCCTTGGGCTTATCTGATATCGGAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33860___yv      1 ATGTTCAAAAAAATTGCGGCAGATGCCTTGGGCTTATCTGATATCGGAAA     50

BSNT_05121___     51 AATTATCGAACCTCAGGACTATGACAAAACAGACGCAGATGACTATGTCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33860___yv     51 AATTATCGAACCTCAGGACTATGACAAAACAGACGCAGATGACTATGTCA    100

BSNT_05121___    101 TGCATGAAGATAATGAGAAAATTTATTTCTTGATTAAAACAAAAGCAGAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33860___yv    101 TGCATGAAGATAATGAGAAAATTTATTTCTTGATTAAAACAAAAGCAGAC    150

BSNT_05121___    151 GAGTATTGCTTTACGAACCTGGCCCTGATCCATGTGGACGGCGAACGCGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33860___yv    151 GAGTATTGCTTTACGAACCTGGCCCTGATCCATGTGGACGGCGAACGCGC    200

BSNT_05121___    201 CACTTCCTCGAAACGAACGTTGAAACGCTATCCTTATTCGCAATATAAAA    250
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU33860___yv    201 CACTTCCTCAAAACGAACGTTGAAACGCTATCCTTATTCGCAATATAAAA    250

BSNT_05121___    251 TCTCTGACGTTTTTCTTGAAACTGCCGGAAAAGTCGATTTGGATGTTGAA    300
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU33860___yv    251 TCTCTGACGTTTTTCTTGAAACTGCCGGAAAAGTGGATTTGGATGTTGAA    300

BSNT_05121___    301 ATTAAGTTCAAGCTGGGCGGTGAACAATTCGACATTGATGTCCACAAAGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33860___yv    301 ATTAAGTTCAAGCTGGGCGGTGAACAATTCGACATTGATGTCCACAAAGA    350

BSNT_05121___    351 CCAGATTGAAAAGTTAAAAGACCTTTATAAAGCACTGCTTCGCATCGCTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33860___yv    351 CCAGATTGAAAAGTTAAAAGACCTTTATAAAGCACTGCTTCGCATCGCTG    400

BSNT_05121___    401 AAACAACCTATGAAAATGACATTTTAATCAATCAAGCGGAGCAAAGCTTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33860___yv    401 AAACAACCTATGAAAATGACATTTTAATCAATCAAGCGGAGCAAAGCTTA    450

BSNT_05121___    451 GATAAAGCAGTGACGATTCTTCACCATACCCGCCCTGAGCACGTCAATAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33860___yv    451 GATAAAGCAGTGACGATTCTTCACCATACCCGCCCTGAGCACGTCAATAT    500

BSNT_05121___    501 TGAAACGCAATACAAAGAGCTGACCAAATTCGGATTCACTTGGCTGACAT    550
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU33860___yv    501 TGAAACGCAATACAAAGAGCTGACCGAATTCGGATTCACTTGGCTGACAT    550

BSNT_05121___    551 CCGTTCGCTCGCAGTATCATATTAAGGATTTTGGGGATGTATTTGAGAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33860___yv    551 CCGTTCGCTCGCAGTATCATATTAAGGATTTTGGGGATGTATTTGAGAAA    600

BSNT_05121___    601 TATATGAATAACTAG    615
                     |||||.|||||||||
BSU33860___yv    601 TATATTAATAACTAG    615


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