Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05124 and BSU33880
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence dna-align/BSNT_05124___yvbJ.1.22522.seq
# -bsequence dna-align/BSU33880___yvbJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05124___yvbJ-BSU33880___yvbJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05124___yvbJ-BSU33880___yvbJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05124___yvbJ
# 2: BSU33880___yvbJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1819
# Identity: 1763/1819 (96.9%)
# Similarity: 1763/1819 (96.9%)
# Gaps: 5/1819 ( 0.3%)
# Score: 8580.0
#
#
#=======================================
BSNT_05124___ 1 ATG---TTTTGTAAGGAATGCGG-TCAAAAAAATAATGAAGGAGCCAAGT 46
||| |||||||||.|.||||| || ..|.|||||||||||||||||||
BSU33880___yv 1 ATGTTATTTTGTAAGAATTGCGGCTC-CCAGAATAATGAAGGAGCCAAGT 49
BSNT_05124___ 47 TTTGTAAACAATGCGGCACCCCGGTCGGAGGGGGCAGCAAACAGGCGAAT 96
|||||||||||||||||||||||.||||||||||||||||||||||.|||
BSU33880___yv 50 TTTGTAAACAATGCGGCACCCCGATCGGAGGGGGCAGCAAACAGGCAAAT 99
BSNT_05124___ 97 CAAGAAACAGCTAGCACTGCAGAAACAAGGCAGGCTCCGCGAAAACCGAT 146
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU33880___yv 100 CAAGAAACAGCTAGCACTGCAGAAACGAGGCAGGCTCCGCGAAAACCGAT 149
BSNT_05124___ 147 CCCTAAGAAAACCATCATTTTATGGAGCAGCATTGCAGCAGCGTGCGTTA 196
||||||||||||||||||||||||||||||||||||.||.||||||||||
BSU33880___yv 150 CCCTAAGAAAACCATCATTTTATGGAGCAGCATTGCCGCGGCGTGCGTTA 199
BSNT_05124___ 197 TATTATTCGCCGCATATAAAACCGGAGCGTACTTTACTTCAAAGGATAGG 246
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU33880___yv 200 TATTATTCGCCGCATATAAAACCGGAGCGTATTTTACTTCAAAGGATAGG 249
BSNT_05124___ 247 TTAGTCGACAAGTTTGAACAGGCCGTAAATGATGAGGATCAGGACCAAAT 296
|||||.||||||||||||||||||||||||||||.|||||||||||||||
BSU33880___yv 250 TTAGTAGACAAGTTTGAACAGGCCGTAAATGATGGGGATCAGGACCAAAT 299
BSNT_05124___ 297 CGCGACTCTGCTTACACCGGTAAATGACAAGCTGAAGCTCACTAAAAATA 346
||||||||||||||||||||||||||||||.||.||.|||||||||||||
BSU33880___yv 300 CGCGACTCTGCTTACACCGGTAAATGACAATCTTAAACTCACTAAAAATA 349
BSNT_05124___ 347 ATGTAAAACCGTTTCTTACATATTTGAAGGATCATCCAGACAAAAAAGAT 396
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33880___yv 350 ATGTAAAACCGTTTCTTACATATTTGAAGGATCATCCAGACAAAAAAGAT 399
BSNT_05124___ 397 GAACTTTTTGCATCGCTGCGTGATGAAACAGCCCAGAAGGATATCGTATA 446
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33880___yv 400 GAACTTTTTGCATCGCTGCGTGATGAAACAGCCCAGAAGGATATCGTATA 449
BSNT_05124___ 447 TGCAGAAAAAGACGGGAAAAGCCTGCTGGTATTTGACCATTACGACTTAA 496
|||.||||||||||||||||||||||||||||||||||||||.|||||||
BSU33880___yv 450 TGCGGAAAAAGACGGGAAAAGCCTGCTGGTATTTGACCATTATGACTTAA 499
BSNT_05124___ 497 AAGTAGCACCTGTTTATTTTGAAGTGAGCAGCAATTATAAAAATACCGAT 546
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU33880___yv 500 AGGTAGCACCTGTTTATTTTGAAGTGAGCAGCAATTATAAAAATACCGAT 549
BSNT_05124___ 547 CTATATGTCAATAAAGAGGAAGCCGGATCTGTAAAGAAAGCAGATCAAGC 596
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33880___yv 550 CTATATGTCAATAAAGAGGAAGCCGGATCTGTAAAGAAAGCAGATCAAGC 599
BSNT_05124___ 597 ACAAACTCTCGGTCCGTACATTCCCGGCGAATATACAGTCTCAGCCAAAC 646
||||||.||.||||||||||||||||||||||||||||||||||||||||
BSU33880___yv 600 ACAAACCCTTGGTCCGTACATTCCCGGCGAATATACAGTCTCAGCCAAAC 649
BSNT_05124___ 647 TGACAAACGATGTCGTTGACCTTGTGAAAAAGGAAGACATTCAGGCGGTT 696
|||.|||||||||||||||||||||||||||||||||||||||||||.||
BSU33880___yv 650 TGAAAAACGATGTCGTTGACCTTGTGAAAAAGGAAGACATTCAGGCGATT 699
BSNT_05124___ 697 GGCGATAGCAGCTTTCGTGTTGATCTCTCATTGGAAGCAGACGATGTGAC 746
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33880___yv 700 GGCGATAGCAGCTTTCGTGTTGATCTCTCATTGGAAGCAGACGATGTGAC 749
BSNT_05124___ 747 ATTCAGCTTAGCGGATGACATCAAGAGCGGGAAGGGAGATTTGCTGATTA 796
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU33880___yv 750 ATTCAGCTTAGCGAATGACATCAAGAGCGGGAAGGGAGATTTGCTGATTA 799
BSNT_05124___ 797 ACGGCAAGTCGATTCATAAAGATCCATTCAAATCCGTAACATATGGTCCG 846
||||.||.||.||||||||||||||.||||||||||||||||||||||||
BSU33880___yv 800 ACGGTAAATCAATTCATAAAGATCCGTTCAAATCCGTAACATATGGTCCG 849
BSNT_05124___ 847 CTGCTGACAGATGGATCAATGACAGCTTCAGTCGAGGCAGAATTTCCGTG 896
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33880___yv 850 CTGCTGACAGATGGATCAATGACAGCTTCAGTCGAGGCAGAATTTCCGTG 899
BSNT_05124___ 897 GGGAAAAACAAAAACTGCCGGCGTTCCGATCGATGACAACGAAATGAAGT 946
||||||||||||||||||||||||||||||||||||.||.||||||.|||
BSU33880___yv 900 GGGAAAAACAAAAACTGCCGGCGTTCCGATCGATGATAAAGAAATGGAGT 949
BSNT_05124___ 947 TAACGTTAATTCCTGATCAAGATACACAGGAACAGATTATGAACACGATT 996
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU33880___yv 950 TAACGTTAATTCCTGATCAAGATACACAGGAACAGATTATGAACACAATT 999
BSNT_05124___ 997 GTCAAAACAACAAAACAATACTCCAAAGCTCTATCTGATGGGAATATAGC 1046
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU33880___yv 1000 GTCAAAACAACAAAACAATACTCCAAAGCTCTATCTGATGGGAATACAGC 1049
BSNT_05124___ 1047 CCAGATGACAGAGGCAAGTGCCAATTGGAAGGCAGAGACGAAGGACACCG 1096
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU33880___yv 1050 CCAGATGACAGAGGCAAGTGCCAATTGGAAGGCGGAGACGAAGGACACCG 1099
BSNT_05124___ 1097 TCGATTCTATGAAAAGCGCGGATTCATACTTAAAAGATAGATACTTGGAA 1146
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33880___yv 1100 TCGATTCTATGAAAAGCGCGGATTCATACTTAAAAGATAGATACTTGGAA 1149
BSNT_05124___ 1147 ACTGATTTTGACCTGGACACATTTGCCCTCTCTCAAAAAAACGACGGGAC 1196
|||||||||||||||||||||||||||||||||||.|||||||||||.||
BSU33880___yv 1150 ACTGATTTTGACCTGGACACATTTGCCCTCTCTCAGAAAAACGACGGAAC 1199
BSNT_05124___ 1197 GTGGCAGGTATCGGTAACAGGAAAAGAACTCCACCAGTCTTCTACGTATA 1246
||||||||||||||||||||||||||||||.||||||||||||.||||||
BSU33880___yv 1200 GTGGCAGGTATCGGTAACAGGAAAAGAACTTCACCAGTCTTCTTCGTATA 1249
BSNT_05124___ 1247 ACGACTATACAAAATCTGAAATGACTGACGACAGTCCGAGTTATGAATAT 1296
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU33880___yv 1250 ACGACTATACAAAGTCTGAAATGACTGACGACAGTCCGAGTTATGAATAT 1299
BSNT_05124___ 1297 CTTCTTTCATATGATAAAAAACAGAAAAAGTGGATTTTCGAAGATGCAGA 1346
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33880___yv 1300 CTTCTTTCATATGATAAAAAACAGAAAAAGTGGATTTTCGAAGATGCAGA 1349
BSNT_05124___ 1347 ATCAACATTCGAATCTGCAGGCACAAATATAAAGAAAATCAAAAATGATA 1396
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33880___yv 1350 ATCAACATTCGAATCTGCAGGCACAAATATAAAGAAAATCAAAAATGATA 1399
BSNT_05124___ 1397 AACCAGAGACATACACTTCCGCCTGGGCTGGCTCGAAAAACAAAGGCAGT 1446
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33880___yv 1400 AACCAGAGACATACACTTCCGCCTGGGCTGGCTCGAAAAACAAAGGCAGT 1449
BSNT_05124___ 1447 GAAAGCTCTGCAAGCGGCAATGTTACAGATGAACAAGTGACATTATTTAT 1496
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU33880___yv 1450 GAAAGCTCTGCAAGCGGCGATGTTACAGATGAACAAGTGACATTATTTAT 1499
BSNT_05124___ 1497 GGGCAGTTATCTGCAAAGTCAGGCAGATGCCGTGAATCAAAATAATTTCT 1546
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33880___yv 1500 GGGCAGTTATCTGCAAAGTCAGGCAGATGCCGTGAATCAAAATAATTTCT 1549
BSNT_05124___ 1547 CACTAATGGAAGACAGCCTTGAAAAAGGCAGTTCCCTTTATTCCGACCAG 1596
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU33880___yv 1550 CACTGATGGAAGACAGCCTTGAAAAAGGCAGTTCCCTTTATTCCGACCAG 1599
BSNT_05124___ 1597 CAGCATCTCGTGGCGAAACTAAATAAAGAGGGGACAACAGAAGACTTTAA 1646
||||||||||||.|||||.|||||||||||||||||||||||||||||||
BSU33880___yv 1600 CAGCATCTCGTGTCGAAATTAAATAAAGAGGGGACAACAGAAGACTTTAA 1649
BSNT_05124___ 1647 TAACTATGAAGTGAAAAGCTGGAGCCAAAATGGGTCGGCTGTCACAATTA 1696
||||||||||||||||||||||||||||||||||||||||.||||.||||
BSU33880___yv 1650 TAACTATGAAGTGAAAAGCTGGAGCCAAAATGGGTCGGCTATCACGATTA 1699
BSNT_05124___ 1697 AAACATACGAAGAATTCGAAATCACAAAATCAGGCGGCAGTCCAAAGCTC 1746
|.||.||.|||||||||.|.||||||||||||||||||||||||||||||
BSU33880___yv 1700 AGACGTATGAAGAATTCTATATCACAAAATCAGGCGGCAGTCCAAAGCTC 1749
BSNT_05124___ 1747 AGAACATATAACTGGACCTATACCGGCGTAGTGAAGAACGGAAGAATTTA 1796
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU33880___yv 1750 AGAACATATAACTGGACCTACACCGGCGTAGTGAAGAACGGAAGAATTTA 1799
BSNT_05124___ 1797 CTTAACGTCTATTCAATAA 1815
|||||||||||||||||||
BSU33880___yv 1800 CTTAACGTCTATTCAATAA 1818
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