Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_05152 and BSU34080

See Amino acid alignment / Visit BSNT_05152 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:46
# Commandline: needle
#    -asequence dna-align/BSNT_05152___yvfS.1.22522.seq
#    -bsequence dna-align/BSU34080___yvfS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05152___yvfS-BSU34080___yvfS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05152___yvfS-BSU34080___yvfS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05152___yvfS
# 2: BSU34080___yvfS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 738
# Identity:     737/738 (99.9%)
# Similarity:   737/738 (99.9%)
# Gaps:           0/738 ( 0.0%)
# Score: 3681.0
# 
#
#=======================================

BSNT_05152___      1 GTGAACGTGCTGCAAAAGCAAAGCATCGCTGAAATGAAAAGGGTGCTTAG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34080___yv      1 GTGAACGTGCTGCAAAAGCAAAGCATCGCTGAAATGAAAAGGGTGCTTAG     50

BSNT_05152___     51 GAACAAGTACTTTGTGCTTTGGTCTCTGATCATGCCGATTGCCTTTTATT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34080___yv     51 GAACAAGTACTTTGTGCTTTGGTCTCTGATCATGCCGATTGCCTTTTATT    100

BSNT_05152___    101 ATTTCTTTACAAATGTAGTGAATACCAACGTCCCTGATCAACGTGCATGG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34080___yv    101 ATTTCTTTACAAATGTAGTGAATACCAACGTCCCTGATCAACGTGCATGG    150

BSNT_05152___    151 GAAGCCCATTACCTGATGTCGATGACAGTCTTCAGCGTGATGGGTTCCTC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34080___yv    151 GAAGCCCATTACCTGATGTCGATGACAGTCTTCAGCGTGATGGGTTCCTC    200

BSNT_05152___    201 TATCATGACGCTTGGCATCCGAATGGTACAAGAACGGTCACAAGGCTGGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34080___yv    201 TATCATGACGCTTGGCATCCGAATGGTACAAGAACGGTCACAAGGCTGGG    250

BSNT_05152___    251 CCGCCTTTATCCGCCTTACGCCTCTTCCGGATCATATCTATTTATCAGCT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34080___yv    251 CCGCCTTTATCCGCCTTACGCCTCTTCCGGATCATATCTATTTATCAGCT    300

BSNT_05152___    301 CAGATGATCGGCCAAAGTGTCATTCACGTTTTATCAATTACCGTCATATT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34080___yv    301 CAGATGATCGGCCAAAGTGTCATTCACGTTTTATCAATTACCGTCATATT    350

BSNT_05152___    351 TCTGTTCGGCGCAATCATCAATGATATTGCCTTGTCACCGTTTGAATGGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34080___yv    351 TCTGTTCGGCGCAATCATCAATGATATTGCCTTGTCACCGTTTGAATGGA    400

BSNT_05152___    401 TGATGAGCGGACTGTGGATTTTGTTTGGCGCATTGCCTTTTTTAGCATTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34080___yv    401 TGATGAGCGGACTGTGGATTTTGTTTGGCGCATTGCCTTTTTTAGCATTA    450

BSNT_05152___    451 GGCACACTAATCGGCCTCATGAGAAAAGTAGAAACAGCGGCCGGAATCAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34080___yv    451 GGCACACTAATCGGCCTCATGAGAAAAGTAGAAACAGCGGCCGGAATCAG    500

BSNT_05152___    501 TAATGTGCTTTATATGCTGCTGGCTTTAGGCGGAGGGATGTGGATGCCGT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34080___yv    501 TAATGTGCTTTATATGCTGCTGGCTTTAGGCGGAGGGATGTGGATGCCGT    550

BSNT_05152___    551 TTGAGGTCATGCCTGACATGATGCAGAGCATTGGCCAGTGGCTTCCGTCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34080___yv    551 TTGAGGTCATGCCTGACATGATGCAGAGCATTGGCCAGTGGCTTCCGTCT    600

BSNT_05152___    601 TATCATTTCGGGAGCGGAGCGTGGGAACTTGTCCGGGGCGGGAGTCCGAC    650
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU34080___yv    601 TATCATTTCGGGAGCGGAGCGTGGGAACTTGTCCGGGGTGGGAGTCCGAC    650

BSNT_05152___    651 TTGGAAAAATATTCTGATATTAATCGCTTATATGATGCTCTTCATGCTAC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34080___yv    651 TTGGAAAAATATTCTGATATTAATCGCTTATATGATGCTCTTCATGCTAC    700

BSNT_05152___    701 TATCTAAATATATAAGAAGAAAACAAGAAGCGGTGTAA    738
                     ||||||||||||||||||||||||||||||||||||||
BSU34080___yv    701 TATCTAAATATATAAGAAGAAAACAAGAAGCGGTGTAA    738


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.