Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05211 and BSU34500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence dna-align/BSNT_05211___yvdR.1.22522.seq
# -bsequence dna-align/BSU34500___yvdR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05211___yvdR-BSU34500___yvdR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05211___yvdR-BSU34500___yvdR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05211___yvdR
# 2: BSU34500___yvdR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity: 311/321 (96.9%)
# Similarity: 311/321 (96.9%)
# Gaps: 0/321 ( 0.0%)
# Score: 1515.0
#
#
#=======================================
BSNT_05211___ 1 ATGGCATGGTTTTTATTAGTGATTGCCGGCATTGAAGAAATTATAGCTGC 50
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU34500___yv 1 ATGGCATGGTTTTTATTAGTGATTGCCGGCATAGAAGAAATTATAGCTGC 50
BSNT_05211___ 51 CATTGCCATGAAATATATTGATGGGACAAGAAAAAAATGGCCGATCATTG 100
||||||||||||||||||.||.||.|||||||||||||||||||||||||
BSU34500___yv 51 CATTGCCATGAAATATATAGACGGAACAAGAAAAAAATGGCCGATCATTG 100
BSNT_05211___ 101 TGATGACGCTTGGATTCGGCTTATCCTTTTACTGCCTGTCCCAAGCGATG 150
|||||||..|||||||||||||||||||||||||||||||||||||||||
BSU34500___yv 101 TGATGACTGTTGGATTCGGCTTATCCTTTTACTGCCTGTCCCAAGCGATG 150
BSNT_05211___ 151 ATCGTCCTGCCTGCCGGAGTCGCTTATGCCGTCTGGACCGGCATTGGCAG 200
|||||||||||||||||||||||.||||||||||||||.||||||||.||
BSU34500___yv 151 ATCGTCCTGCCTGCCGGAGTCGCATATGCCGTCTGGACTGGCATTGGAAG 200
BSNT_05211___ 201 CATTGGCGTTTCGGCGGTCGGGCTCATCTGGTTTAAGGAGCGGTTTCAGC 250
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU34500___yv 201 CATTGGTGTTTCGGCGGTCGGGCTCATCTGGTTTAAGGAGCGGTTTCAGC 250
BSNT_05211___ 251 TTTCACAGGTGATTTCACTTTGCCTTATCCTAGCCGGCGTCATCGGCCTG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34500___yv 251 TTTCACAGGTGATTTCACTTTGCCTTATCCTAGCCGGCGTCATCGGCCTG 300
BSNT_05211___ 301 CGTCTTACGTCATCTTCATAA 321
|||||||||||||||||||||
BSU34500___yv 301 CGTCTTACGTCATCTTCATAA 321
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