Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05268 and BSU34600

See Amino acid alignment / Visit BSNT_05268 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence dna-align/BSNT_05268___yvdH.1.22522.seq
#    -bsequence dna-align/BSU34600___mdxF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05268___yvdH-BSU34600___mdxF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05268___yvdH-BSU34600___mdxF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05268___yvdH
# 2: BSU34600___mdxF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1311
# Identity:    1290/1311 (98.4%)
# Similarity:  1290/1311 (98.4%)
# Gaps:           3/1311 ( 0.2%)
# Score: 6367.0
# 
#
#=======================================

BSNT_05268___      1 ATGAATAAACATCACACACTTGCAAAGCAAAAACGAAAGGCAGGGCTTTT     50
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU34600___md      1 ATGAATAAACATCACACACTTACAAAGCAAAAACGAAAGGCAGGGCTTTT     50

BSNT_05268___     51 ATCGATCATTCCAGGACTTGGGCAGATTGCGAATCAGCAATTGTCAAAGG    100
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU34600___md     51 ATCGATCATTCCAGGACTTGGGCAGATTGCGAATCAGCAGTTGTCAAAGG    100

BSNT_05268___    101 GGCTCTTATTTCTAGCCATCACAGGCTTGTTTGCTTTTGAATTATGCGTT    150
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU34600___md    101 GGCTCTTATTTCTTGCCATCACAGGCTTGTTTGCTTTTGAATTATGCGTT    150

BSNT_05268___    151 TTCGGTATACAGGCGCTAAGCGGATTGATGACATTGGGAAGTGTTCCCGG    200
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU34600___md    151 TTCGGTATACAGGCGCTAACCGGATTGATGACATTGGGAAGTGTTCCCGG    200

BSNT_05268___    201 TGAAGATCACTCGCTGTTTATGCTGATTGAAGGCACGCTGCAATTGATCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md    201 TGAAGATCACTCGCTGTTTATGCTGATTGAAGGCACGCTGCAATTGATCG    250

BSNT_05268___    251 TGACGGTGATTTTCCTCATGTTCTATATCTTTAATATTCATGATTCGCGT    300
                     ||||..||||||||||||||||||||||||||||||||||||||||.|||
BSU34600___md    251 TGACAATGATTTTCCTCATGTTCTATATCTTTAATATTCATGATTCACGT    300

BSNT_05268___    301 AAGACAGCCGCTATGAAAGCGGCGGGTTTGGAGGTCAATACAACAGCCAA    350
                     |||||.||||||||||||||||||||||||||.|||||||||||||||||
BSU34600___md    301 AAGACCGCCGCTATGAAAGCGGCGGGTTTGGAAGTCAATACAACAGCCAA    350

BSNT_05268___    351 GGATATGATCTGTCATGCGGGCGATAAAGGGTTTCCATATCTATTTACAC    400
                     ||||||||||||||||||||||||||||||.|||||.|||||||||||||
BSU34600___md    351 GGATATGATCTGTCATGCGGGCGATAAAGGTTTTCCGTATCTATTTACAC    400

BSNT_05268___    401 TGCCGGCATATATCATGATGGTGTTTTTTGTGATTATCTTTCCGGTTTTG    450
                     |||||||||||||||||||||||   |||||||||||.||||||||||||
BSU34600___md    401 TGCCGGCATATATCATGATGGTG---TTTGTGATTATTTTTCCGGTTTTG    447

BSNT_05268___    451 GTGACTCTGTTTGTTGCATTAACAAACTATGATTTTTATCATATTCCGCC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md    448 GTGACTCTGTTTGTTGCATTAACAAACTATGATTTTTATCATATTCCGCC    497

BSNT_05268___    501 TAATCGTCTGATTGACTGGGTCGGGTTTAAAAATTTCTTAAATATTTTTT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md    498 TAATCGTCTGATTGACTGGGTCGGGTTTAAAAATTTCTTAAATATTTTTT    547

BSNT_05268___    551 TCCTTGGCTCCTATCGTGAAACATTTGTGAATGTACTGGGCTGGACGGTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md    548 TCCTTGGCTCCTATCGTGAAACATTTGTGAATGTACTGGGCTGGACGGTT    597

BSNT_05268___    601 ATCTGGACAATCTGCGCGACAACGCTGCAAATCATTTTAGGGATTGTGAC    650
                     ||||||||||||||.||.|||||||||||||||||||||||.||||||||
BSU34600___md    598 ATCTGGACAATCTGTGCAACAACGCTGCAAATCATTTTAGGTATTGTGAC    647

BSNT_05268___    651 GGCACTTTTCGTCAATCAGGATTTTATAAAAGGCAAGCGGATATTTCGAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md    648 GGCACTTTTCGTCAATCAGGATTTTATAAAAGGCAAGCGGATATTTCGAA    697

BSNT_05268___    701 TGATTTTCTTATTTCCATGGGCTGTTCCGGCTTTTATTACAATCATGAGT    750
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU34600___md    698 TGATTTTCTTATTTCCATGGGCTGTTCCGGCGTTTATTACAATCATGAGT    747

BSNT_05268___    751 TTTTCCAACATGTTTAACGACAGCATAGGAGCGGTGAATGCACAGGTGAT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md    748 TTTTCCAACATGTTTAACGACAGCATAGGAGCGGTGAATGCACAGGTGAT    797

BSNT_05268___    801 ACCATTATTCAATCACCTGCCGTTTGTCGAGCTGCCTGCGATCGCGTGGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md    798 ACCATTATTCAATCACCTGCCGTTTGTCGAGCTGCCTGCGATCGCGTGGA    847

BSNT_05268___    851 AGACTGATCCTTTCTGGACAAAGACAGCCCTCATTATGATTCAGACGTGG    900
                     ||||.||||||||||||||||||||||||||||||||||||||.||||||
BSU34600___md    848 AGACCGATCCTTTCTGGACAAAGACAGCCCTCATTATGATTCAAACGTGG    897

BSNT_05268___    901 CTCGGCTTTCCATATATATATGTCATGGTAACGGGAGTGCTTCAGGCGAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md    898 CTCGGCTTTCCATATATATATGTCATGGTAACGGGAGTGCTTCAGGCGAT    947

BSNT_05268___    951 TCCAGGTGAATTGTATGAAGCGGCAAAGATTGACGGGGCCACTTTTATTC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md    948 TCCAGGTGAATTGTATGAAGCGGCAAAGATTGACGGGGCCACTTTTATTC    997

BSNT_05268___   1001 AGCGTTTTCGGCATATTACATTCCCGATGATTTTATTTGCCACAGCACCC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md    998 AGCGTTTTCGGCATATTACATTCCCGATGATTTTATTTGCCACAGCACCC   1047

BSNT_05268___   1051 GTGATGATTACTCAGTATACGTTTAATTTCAATAATTTCTCGATCATCTA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md   1048 GTGATGATTACTCAGTATACGTTTAATTTCAATAATTTCTCGATCATCTA   1097

BSNT_05268___   1101 TTTATTTAATGAGGGAGGGCCAGGCAGTGCGGGAGCCGGGGCCGGATCGA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md   1098 TTTATTTAATGAGGGAGGGCCAGGCAGTGCGGGAGCCGGGGCCGGATCGA   1147

BSNT_05268___   1151 CCGATATCTTAATTTCGTGGATTTATAAACTGACAACAGGCACATCACCC   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md   1148 CCGATATCTTAATTTCGTGGATTTATAAACTGACAACAGGCACATCACCC   1197

BSNT_05268___   1201 CAATATTCCGTTGCGGCGGCTGTGACACTGTTAATTTCTTTCATTGTCAT   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md   1198 CAATATTCCGTTGCGGCGGCTGTGACACTGTTAATTTCTTTCATTGTCAT   1247

BSNT_05268___   1251 TGGAATTTCACTGATTGCTTTCAAAAAATCGAATGCTTTTGGCAATGAGG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34600___md   1248 TGGAATTTCACTGATTGCTTTCAAAAAATCGAATGCTTTTGGCAATGAGG   1297

BSNT_05268___   1301 AGGTTATGTAG   1311
                     |||||||||||
BSU34600___md   1298 AGGTTATGTAG   1308


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