Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05270 and BSU34610

See Amino acid alignment / Visit BSNT_05270 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence dna-align/BSNT_05270___yvdG.1.22522.seq
#    -bsequence dna-align/BSU34610___mdxE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05270___yvdG-BSU34610___mdxE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05270___yvdG-BSU34610___mdxE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05270___yvdG
# 2: BSU34610___mdxE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1254
# Identity:    1222/1254 (97.4%)
# Similarity:  1222/1254 (97.4%)
# Gaps:           0/1254 ( 0.0%)
# Score: 5982.0
# 
#
#=======================================

BSNT_05270___      1 ATGGTTCTTTTAAAAAAGGGATTCGCCATATTGGCGGCATCATTCCTGGC     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU34610___md      1 ATGGTTCTTTTAAAAAAGGGGTTCGCCATATTGGCGGCATCATTCCTGGC     50

BSNT_05270___     51 AATCGGCCTTGCCGCCTGCCAAAGTTCAAAAAATCCAGCAAGCGCTGATG    100
                     |||||||||||||||||||..||||||||||||||||||||||.||||||
BSU34610___md     51 AATCGGCCTTGCCGCCTGCTCAAGTTCAAAAAATCCAGCAAGCTCTGATG    100

BSNT_05270___    101 GCAAAAAGGTGCTGACTGTGTCTATCGAAGAAACGTATAAAGAATACATT    150
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU34610___md    101 GCAAAAAGGTGCTGACTGTGTCTGTCGAAGAAACGTATAAAGAATACATT    150

BSNT_05270___    151 GAAAGCATAAAAACAAAGTTCGAAAAAGAGAATGATGTCACAGTAAAAAT    200
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU34610___md    151 GAAAGCATAAAAACAAAGTTCGAAAAAGAAAATGATGTCACAGTAAAAAT    200

BSNT_05270___    201 TGTTGAAAAGCAAATGTTCGAACAGTTAGAAGCGCTTCCTCTTGATGGCC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34610___md    201 TGTTGAAAAGCAAATGTTCGAACAGTTAGAAGCGCTTCCTCTTGATGGCC    250

BSNT_05270___    251 CGGCGGGTAATGCGCCTGATGTTATGCTTGCTGCATATGACCGGATCGGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34610___md    251 CGGCGGGTAATGCGCCTGATGTTATGCTTGCTGCATATGACCGGATCGGC    300

BSNT_05270___    301 GGTTTGGGACAGCAAGGACATTTGCTTGACATTAAGCCATCTCATACAAA    350
                     |||||||||||.|||||||||||.|||||.||||||||||||.|.|||||
BSU34610___md    301 GGTTTGGGACAACAAGGACATTTACTTGATATTAAGCCATCTAACACAAA    350

BSNT_05270___    351 AAGCTTTGGTGATAAAGAAATGCAGCAGGTGACAGTTGACGGCAAAGTGT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34610___md    351 AAGCTTTGGTGATAAAGAAATGCAGCAGGTGACAGTTGACGGCAAAGTGT    400

BSNT_05270___    401 ACGGAATGCCGCTAGTCATTGAGACACTTATTTTGTATTACAACAAAGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34610___md    401 ACGGAATGCCGCTAGTCATTGAGACACTTATTTTGTATTACAACAAAGAT    450

BSNT_05270___    451 CTCTTAAAGACAGCGCCAAAAACATTTAAAGACCTTGAAAAATTAACAGA    500
                     ||.|||||.||||||||||||||||||||||||||||||||.|||||.||
BSU34610___md    451 CTTTTAAAAACAGCGCCAAAAACATTTAAAGACCTTGAAAAGTTAACGGA    500

BSNT_05270___    501 GGATCCTCGATTCGCGTTTGCTTCGGAAAAAGGAAAATCAACCGGATTTT    550
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU34610___md    501 AGATCCTCGATTCGCGTTTGCTTCGGAAAAAGGAAAATCAACCGGATTTT    550

BSNT_05270___    551 TAGCAAAATGGACTGACTTTTATATGTCGTACGGCTTATTGGCTGGATAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34610___md    551 TAGCAAAATGGACTGACTTTTATATGTCGTACGGCTTATTGGCTGGATAC    600

BSNT_05270___    601 GGCGGATATGTATTTGGAAAAAACGGCACAGATTCCGGGGACATCGGCCT    650
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU34610___md    601 GGCGGATATGTGTTTGGAAAAAACGGCACAGATTCCGGGGACATCGGCCT    650

BSNT_05270___    651 GAACAACAAAGGGGCTGTAGAAGCGGTGAAATATGCGGAGAAATGGTTTA    700
                     ||||||.||||||||||||||||||||||||||||||||||||||||||.
BSU34610___md    651 GAACAATAAAGGGGCTGTAGAAGCGGTGAAATATGCGGAGAAATGGTTTG    700

BSNT_05270___    701 AAACCTATTGGCCGAAAGGGATGCAAGACAATTCAAACGCAGACGACTTT    750
                     |.||.||||||||||||||.||||||||||||||||.|||||||||||||
BSU34610___md    701 AGACATATTGGCCGAAAGGAATGCAAGACAATTCAAGCGCAGACGACTTT    750

BSNT_05270___    751 ATTCAGCAGATGTTTTTAGAAGGCAAAGCGGCTGCGATCATTGGCGGTCC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34610___md    751 ATTCAGCAGATGTTTTTAGAAGGCAAAGCGGCTGCGATCATTGGCGGTCC    800

BSNT_05270___    801 TTGGTCAGCTGCCAACTATAAAGAGGCTAAATTGAACTACGGAGCGGCTC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34610___md    801 TTGGTCAGCTGCCAACTATAAAGAGGCTAAATTGAACTACGGAGCGGCTC    850

BSNT_05270___    851 CCATTCCGACATTGCCAAATGGAGAAGAATACGCTCCTTTTGCCGGCGGG    900
                     ||||||||||||||||||||||||||||||||||.||||||||.||||||
BSU34610___md    851 CCATTCCGACATTGCCAAATGGAGAAGAATACGCCCCTTTTGCTGGCGGG    900

BSNT_05270___    901 AAGGGCTGGGTAGCTTCAAAATATACAAAAGAGCCCGAGCTGGCTGAAAA    950
                     |||||||||||.||.||.||||||||||||||||||||||||||||||||
BSU34610___md    901 AAGGGCTGGGTTGCCTCGAAATATACAAAAGAGCCCGAGCTGGCTGAAAA    950

BSNT_05270___    951 ATGGCTTGAGTATGCCGCAAATGATGCCAATGCTTACGCTTTTTATGAGG   1000
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU34610___md    951 ATGGCTTGAGTATGCTGCAAATGATGCCAATGCTTACGCTTTTTATGAGG   1000

BSNT_05270___   1001 ATACAAACGAAGTTCCAGCTAACACTGCTGCAAGGAAGAAAGCCGATGAG   1050
                     ||||||||||||||||.||.|||||.||||||||||||||||||||||||
BSU34610___md   1001 ATACAAACGAAGTTCCGGCCAACACGGCTGCAAGGAAGAAAGCCGATGAG   1050

BSNT_05270___   1051 CAAAAGAATGAACTGACGTCAGCTGTGATTAAACAATATGAAACAGCAAC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34610___md   1051 CAAAAGAATGAACTGACGTCAGCTGTGATTAAACAATATGAAACAGCAAC   1100

BSNT_05270___   1101 GCCGACTCCAAATATTCCGGAAATGGCTGAAGTATGGACAGGAGCGGAAA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34610___md   1101 GCCGACTCCAAATATTCCGGAAATGGCTGAAGTATGGACAGGAGCGGAAA   1150

BSNT_05270___   1151 GTTTAATTTTTGATGCAGCTTCAGGAAAAAAATCGACACAAACATCAGCG   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34610___md   1151 GTTTAATTTTTGATGCAGCTTCAGGAAAAAAATCGACACAAACATCAGCG   1200

BSNT_05270___   1201 AATGATGCTGTAAACGTCATAAAGGAAAATATTAAAGAAAAGTATGTGAA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34610___md   1201 AATGATGCTGTAAACGTCATAAAGGAAAATATTAAAGAAAAGTATGTGAA   1250

BSNT_05270___   1251 ATAA   1254
                     ||||
BSU34610___md   1251 ATAA   1254


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