Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05273 and BSU34620

See Amino acid alignment / Visit BSNT_05273 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence dna-align/BSNT_05273___yvdF.1.22522.seq
#    -bsequence dna-align/BSU34620___mdxD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05273___yvdF-BSU34620___mdxD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05273___yvdF-BSU34620___mdxD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05273___yvdF
# 2: BSU34620___mdxD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1770
# Identity:    1728/1770 (97.6%)
# Similarity:  1728/1770 (97.6%)
# Gaps:           6/1770 ( 0.3%)
# Score: 8485.0
# 
#
#=======================================

BSNT_05273___      1 ---ATGGAATATGCAGCGATTCACCACCAGCCATTCAGCACAGATGCTTA     47
                        ||||||||||||||||||||.||||||||||||||||||||||||||
BSU34620___md      1 ATGATGGAATATGCAGCGATTCATCACCAGCCATTCAGCACAGATGCTTA     50

BSNT_05273___     48 TTCTTATGATGGGCGGACTGTGCATATCAAGATTCGGACGAAAAAAGGTG     97
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md     51 TTCTTATGATGGGCGGACTGTGCATATCAAGATTCGGACGAAAAAAGGTG    100

BSNT_05273___     98 ATGCAGATCACATTCGATTCATTTGGGGTGATCCCTATGAGTACAACGAC    147
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md    101 ATGCAGATCACATTCGATTCATTTGGGGTGATCCCTATGAGTACAACGAC    150

BSNT_05273___    148 GGCAAATGGTCCGCAAACGAGCAGCCGATGAGAAAAATTGCTGCAACAGA    197
                     |||||||||||.||||||||||||||||||||.|||||||||||.|||||
BSU34620___md    151 GGCAAATGGTCGGCAAACGAGCAGCCGATGAGGAAAATTGCTGCTACAGA    200

BSNT_05273___    198 AATGCATGACTATTGGTTTGCTGAAGTGGTGCCGCCATTTAGACGTTTAC    247
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU34620___md    201 AATGCATGACTATTGGTTTGCTGAAGTGGTGCCGCCATTTAGGCGTTTAC    250

BSNT_05273___    248 AATATGCGTTTGTTGTAACAGACGATCATGAAGATATCTTTTTCGGAAGT    297
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU34620___md    251 AATATGCGTTTGTTGTAACAGACGATCATGAAGACATCTTTTTCGGAAGT    300

BSNT_05273___    298 TCGGGTGTATGCCCTTATAACGAAAAAACACTGGAAACGATTCATTATTA    347
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md    301 TCGGGTGTATGCCCTTATAACGAAAAAACACTGGAAACGATTCATTATTA    350

BSNT_05273___    348 CTTTAAATTTCCGTTTGTTCACGAGGCTGATACATTTCAAGCGCCTGAAT    397
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md    351 CTTTAAATTTCCGTTTGTTCACGAGGCTGATACATTTCAAGCGCCTGAAT    400

BSNT_05273___    398 GGGTCAAGTCAACGGTTTGGTATCAAATTTTTCCGGAGCGTTTTGCAAAT    447
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md    401 GGGTCAAGTCAACGGTTTGGTATCAAATTTTTCCGGAGCGTTTTGCAAAT    450

BSNT_05273___    448 GGAAGAGAAGACTTGTCACCGAAGAATGCATTGCCGTGGGGGAGCAAGGA    497
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md    451 GGAAGAGAAGACTTGTCACCGAAGAATGCATTGCCGTGGGGGAGCAAGGA    500

BSNT_05273___    498 CCCGGGCGTCAATGATTTTTTTGGAGGAGATTTGCAAGGGATTGTTGACA    547
                     |||||.|||||||||||||||||||||.|||||.|||||.||||||||||
BSU34620___md    501 CCCGGACGTCAATGATTTTTTTGGAGGGGATTTACAAGGAATTGTTGACA    550

BSNT_05273___    548 AGCTTGATTATTTAGAGGATTTAGGGGTGAACGGCATTTATCTGACGCCG    597
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU34620___md    551 AGCTTGATTATTTAGAGGATTTAGGGGTGAACGGCATTTATCTGACACCG    600

BSNT_05273___    598 ATCTTTTCCGCGCCTTCTAATCATAAATACGACACGCTGGATTACTTTTC    647
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md    601 ATCTTTTCCGCGCCTTCTAATCATAAATACGACACGCTGGATTACTTTTC    650

BSNT_05273___    648 TATTGATCCGCATTTCGGGGATCCAGAGATTTTTCGTACATTTGTCAGCC    697
                     ||||||||||||||||||||||||.|||.|||||||||||||.|||||||
BSU34620___md    651 TATTGATCCGCATTTCGGGGATCCTGAGCTTTTTCGTACATTGGTCAGCC    700

BSNT_05273___    698 AGCTGCATCAGCGGGGGATGAGAATTATGCTTGATGCGGTTTTTAACCAT    747
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md    701 AGCTGCATCAGCGGGGGATGAGAATTATGCTTGATGCGGTTTTTAACCAT    750

BSNT_05273___    748 ATAGGAAGCGCGTCTCCGCAATGGCAGGATGTCGTCAAAAACGGAGATCT    797
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU34620___md    751 ATAGGAAGCGCGTCTCCGCAATGGCAGGATGTCGTCAAAAACGGAGATCA    800

BSNT_05273___    798 ATCCCGCTATAAGGACTGGTTCCATATTCACTCTTTTCCCGTCACAGACG    847
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md    801 ATCCCGCTATAAGGACTGGTTCCATATTCACTCTTTTCCCGTCACAGACG    850

BSNT_05273___    848 ACAATTATGACAGATTTGCTTTTACAGCTGATATGCCGAAGCTAAACACG    897
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md    851 ACAATTATGACAGATTTGCTTTTACAGCTGATATGCCGAAGCTAAACACG    900

BSNT_05273___    898 GCTAATCCCGAAGTGCAGAAATATTTGCTTGATATTGCTTTGTACTGGAT    947
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU34620___md    901 GCTAATCCCGAGGTGCAGAAATATTTGCTTGATATTGCTTTGTACTGGAT    950

BSNT_05273___    948 TCGCGAATTTGACATTGACGGCTGGCGTTTGGATGTCGCAAATGAAGTGG    997
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md    951 TCGCGAATTTGACATTGACGGCTGGCGTTTGGATGTCGCAAATGAAGTGG   1000

BSNT_05273___    998 ATCACGTGTTTTGGAAGACATTTAGGCAGGCTGTATCAGCAGAAAATCCT   1047
                     |||||||.|||||||||||||||||||||||||||||..|.|||||.|||
BSU34620___md   1001 ATCACGTTTTTTGGAAGACATTTAGGCAGGCTGTATCTACTGAAAAGCCT   1050

BSNT_05273___   1048 GATGTTTATATTTTAGGTGAGATCTGGCATTCTGCCGAACCCTGGCTTAG   1097
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md   1051 GATGTTTATATTTTAGGTGAGATCTGGCATTCTGCCGAACCCTGGCTTAG   1100

BSNT_05273___   1098 AGGGGATGAATTTCATGCGGCGATGAATTACCCTTTTACAGAGCCTATGA   1147
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md   1101 AGGGGATGAATTTCATGCGGCGATGAATTACCCTTTTACAGAGCCTATGA   1150

BSNT_05273___   1148 TTGAATATTTTGCTGACCGGACGATTCCAGCCTCACGTATGGCTCACCGT   1197
                     |||||||.||||||||||.||||||..||||.||||||||||||||||||
BSU34620___md   1151 TTGAATACTTTGCTGACCAGACGATCTCAGCTTCACGTATGGCTCACCGT   1200

BSNT_05273___   1198 GTCAATGCACATTTGATGAATGGAATGAAGCAGGCCAATGAGGTGATGTT   1247
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md   1201 GTCAATGCACATTTGATGAATGGAATGAAGCAGGCCAATGAGGTGATGTT   1250

BSNT_05273___   1248 TAATTTACTGGATAGCC---ATACAAAGCGCCTTTTGACCAGATGCCGCA   1294
                     |||||||||||||||||   ||||||||||||||||||||||||||||||
BSU34620___md   1251 TAATTTACTGGATAGCCATGATACAAAGCGCCTTTTGACCAGATGCCGCA   1300

BSNT_05273___   1295 ATGATGAGAAGAAAGCACGCGCGTTGCTGGCCTTTATGTTTGCCCAGACA   1344
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md   1301 ATGATGAGAAGAAAGCACGCGCGTTGCTGGCCTTTATGTTTGCCCAGACA   1350

BSNT_05273___   1345 GGCTCACCATGCATCTATTACGGGACGGAAATCGGGCTGGACGGCGAAAA   1394
                     ||||||||||||||.||||||||.|||||||||||||||.||||||||||
BSU34620___md   1351 GGCTCACCATGCATTTATTACGGAACGGAAATCGGGCTGAACGGCGAAAA   1400

BSNT_05273___   1395 TGATCCATTATGCCGGAAATGTATGGTTTGGGAAAAGGAGAAGCAAAACC   1444
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU34620___md   1401 TGATCCATTATGCCGGAAATGTATGGTTTGGGAAAAAGAGAAGCAAAACC   1450

BSNT_05273___   1445 AAGACATGCTGCGATTTATGAAACGGTTAATTGCTTTACGCAAGCAGGAA   1494
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU34620___md   1451 AAGACATGCTGCAATTTATGAAACGGTTAATTGCTTTACGCAAGCAGGAA   1500

BSNT_05273___   1495 AACACTTTATTGACTGAAGGACATCTTGAGTGGAATCTGCTGGACGACAA   1544
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md   1501 AACACTTTATTGACTGAAGGACATCTTGAGTGGAATCTGCTGGACGACAA   1550

BSNT_05273___   1545 AAATGATTTTATTAGCTTTTCGCGGACTCTTGATGAAAAAATACTGATTT   1594
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU34620___md   1551 AAATGATTTCATTAGCTTTTCGCGGACTCTTGATGAAAAAATACTGATTT   1600

BSNT_05273___   1595 ATTTCTTTAATCAAGGGAATGCGGTTCAACACGTCAGTTTACGAGAGTTG   1644
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU34620___md   1601 ATTTCTTTAATCAAGGGAATGTGGTTCAACACGTCAGTTTACGAGAGTTG   1650

BSNT_05273___   1645 AATATTGATAGGAATAAGAAAATCTGTGATGCATGGACAGAGCAGCCGCT   1694
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34620___md   1651 AATATTGATAGGAATAAGAAAATCTGTGATGCATGGACAGAGCAGCCGCT   1700

BSNT_05273___   1695 TCATCATCACGATGTCATTGCTGTTCAGCCGGGAGAATTTTTGATTTTGA   1744
                     .||.|||||||||||||||||.||||||||||||||||||||||||||||
BSU34620___md   1701 ACAGCATCACGATGTCATTGCCGTTCAGCCGGGAGAATTTTTGATTTTGA   1750

BSNT_05273___   1745 GTGCTGCCGCCCCTGTATAA   1764
                     ||||||||||||||||||||
BSU34620___md   1751 GTGCTGCCGCCCCTGTATAA   1770


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