Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05289 and BSU34730

See Amino acid alignment / Visit BSNT_05289 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence dna-align/BSNT_05289___yvcN.1.22522.seq
#    -bsequence dna-align/BSU34730___yvcN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05289___yvcN-BSU34730___yvcN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05289___yvcN-BSU34730___yvcN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05289___yvcN
# 2: BSU34730___yvcN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 765
# Identity:     738/765 (96.5%)
# Similarity:   738/765 (96.5%)
# Gaps:           9/765 ( 1.2%)
# Score: 3618.0
# 
#
#=======================================

BSNT_05289___      1 ---------ATGAGTGACTTTCTAAAAGACTGCTTTCAGAAAATCGGCTG     41
                              |||||||||||||||||||||||||||||||||||||||||
BSU34730___yv      1 GTGATAAAAATGAGTGACTTTCTAAAAGACTGCTTTCAGAAAATCGGCTG     50

BSNT_05289___     42 GGAGAAAGATCATGTCAGCTTCGGCGATCTTCCCCTTTTTCTCAAAGCAA     91
                     |||||||||.||||||||||||||||||||||||||||||||.|||||||
BSU34730___yv     51 GGAGAAAGACCATGTCAGCTTCGGCGATCTTCCCCTTTTTCTTAAAGCAA    100

BSNT_05289___     92 TGGCATACCGTTTTCCATTCGAAAACCGTGCCGTACTTGCAAAAGAGAAT    141
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34730___yv    101 TGGCATACCGTTTTCCATTCGAAAACCGTGCCGTACTTGCAAAAGAGAAT    150

BSNT_05289___    142 TATAAGATCACAAAAGAAGAGCTATGGCGACGTCTGCTCAAAGATCAGCA    191
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34730___yv    151 TATAAGATCACAAAAGAAGAGCTATGGCGACGTCTGCTCAAAGATCAGCA    200

BSNT_05289___    192 CGGCGGCCTATGCTACGATTTAAATGGTTTTCTTTATTTTGTCTTGCGTG    241
                     |||||||||||||||||||.||||||||||.|||||||||||||||||||
BSU34730___yv    201 CGGCGGCCTATGCTACGATCTAAATGGTTTCCTTTATTTTGTCTTGCGTG    250

BSNT_05289___    242 AGGCTGGGTTTCATGTGAAGCTCATTCGAGGAACGGTTTATGCAGGCGAT    291
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU34730___yv    251 AGGCCGGGTTTCATGTGAAGCTCATTCGAGGAACGGTTTATGCAGGCGAT    300

BSNT_05289___    292 CAAGAGGGATGGGCACTAGAAGGGACGCATGCTGCTGTATGGCTGTCTGC    341
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34730___yv    301 CAAGAGGGATGGGCACTAGAAGGGACGCATGCTGCTGTATGGCTGTCTGC    350

BSNT_05289___    342 GGAAAACGGCGATTACCTCGTTGATATCGGCTTCGGCATCAACCTGGCGC    391
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34730___yv    351 GGAAAACGGCGATTACCTCGTTGATATCGGCTTCGGCATCAACCTGGCGC    400

BSNT_05289___    392 TCCAGCCGATACCGCTTTCCGGAGAAACGGTACAGTCACCAGTCGGGTCA    441
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34730___yv    401 TCCAGCCGATACCGCTTTCCGGAGAAACGGTACAGTCACCAGTCGGGTCA    450

BSNT_05289___    442 TTCCGAATCAAAAGAGAAGAGACAGAAAAGGGCAGCCATGTTCTGCTGAT    491
                     |||||||||||||..|||||||||||||||||||||.|||||||||||||
BSU34730___yv    451 TTCCGAATCAAAAAGGAAGAGACAGAAAAGGGCAGCTATGTTCTGCTGAT    500

BSNT_05289___    492 GGACAAGGGAGAAGGCTGGCAAATCGGGTACGCCTTTACTCTTGAAGAGA    541
                     ||||||.|||||||||||||||||.||||||||||||||.||||||||||
BSU34730___yv    501 GGACAAAGGAGAAGGCTGGCAAATTGGGTACGCCTTTACCCTTGAAGAGA    550

BSNT_05289___    542 GTGATCTCGGTGATTTAGATAACATGAAGGACATCATTCACTCTCATGAA    591
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34730___yv    551 GTGATCTCGGTGATTTAGATAACATGAAGGACATCATTCACTCTCATGAA    600

BSNT_05289___    592 AAATCTCCTTTTAACAAATCCCCGCTTGCCTCAAAGCTGACGCCGAGCGG    641
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU34730___yv    601 AAATCTCCTTTTAACAAATCCCTGCTTGCCTCAAAGCTGACGCCGAGCGG    650

BSNT_05289___    642 AAGGATGGTCATGTCAGAGCGCCATTTTACGATTCATGAAAACGGCAGTG    691
                     ||||||||||||||||||||||||||||||||||.|||||||||||.||.
BSU34730___yv    651 AAGGATGGTCATGTCAGAGCGCCATTTTACGATTTATGAAAACGGCGGTA    700

BSNT_05289___    692 ACATTCAAAAAAGTGACATTGGCCCTTCAGAATTTGAAGAGAAATTAAAT    741
                     |||||||||||||.|||||.||||||||||.|||||||||||||||||||
BSU34730___yv    701 ACATTCAAAAAAGCGACATCGGCCCTTCAGGATTTGAAGAGAAATTAAAT    750

BSNT_05289___    742 ACTCATTTTTTGTAA    756
                     |||||||||||||||
BSU34730___yv    751 ACTCATTTTTTGTAA    765


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