Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05300 and BSU34820

See Amino acid alignment / Visit BSNT_05300 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence dna-align/BSNT_05300___yvcC.1.22522.seq
#    -bsequence dna-align/BSU34820___bmrA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05300___yvcC-BSU34820___bmrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05300___yvcC-BSU34820___bmrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05300___yvcC
# 2: BSU34820___bmrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1770
# Identity:    1732/1770 (97.9%)
# Similarity:  1732/1770 (97.9%)
# Gaps:           0/1770 ( 0.0%)
# Score: 8508.0
# 
#
#=======================================

BSNT_05300___      1 ATGCCAAACCAGAAACAAAAATCTAAAAGTAAATTGAAACCCTTTTTTGC     50
                     |||||||.|.||||||||||||||||||||||||||||||||||||||||
BSU34820___bm      1 ATGCCAACCAAGAAACAAAAATCTAAAAGTAAATTGAAACCCTTTTTTGC     50

BSNT_05300___     51 CTTAGTAAGACGTACCAATCCTTCTTATGGAAAGCTCGCCTTTGCGCTTG    100
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU34820___bm     51 CTTAGTAAGACGGACCAATCCTTCTTATGGAAAGCTCGCCTTTGCGCTTG    100

BSNT_05300___    101 CCCTCAGTGTTGTAACCACACTGGTCAGCCTGCTCATTCCATTATTAACG    150
                     ||||||||||.||||||||.||||||||||||||||||||||||||||||
BSU34820___bm    101 CCCTCAGTGTAGTAACCACGCTGGTCAGCCTGCTCATTCCATTATTAACG    150

BSNT_05300___    151 AAGCAGCTTGTCGATGATTTTTCTATGTCAAATCTGTCAGGCACGCAAAT    200
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU34820___bm    151 AAGCAGCTTGTCGATGGTTTTTCTATGTCAAATCTGTCAGGCACGCAAAT    200

BSNT_05300___    201 CGGTTTGATCGCGCTGGTGTTTTTCGTTCAGGCGGGTTTAAGCGCTTATG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34820___bm    201 CGGTTTGATCGCGCTGGTGTTTTTCGTTCAGGCGGGTTTAAGCGCTTATG    250

BSNT_05300___    251 CCACCTATGCGCTTAACTATAATGGACAAAAAATCATTTCCGGACTGCGG    300
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU34820___bm    251 CCACCTATGCGCTTAACTATAATGGACAAAAAATCATTTCCGGGCTGCGG    300

BSNT_05300___    301 GAGTTATTATGGAAGAAATTAATTAAGCTTCCTGTCTCTTATTTCGATAC    350
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU34820___bm    301 GAGTTATTATGGAAGAAATTAATTAAGCTGCCTGTCTCTTATTTCGATAC    350

BSNT_05300___    351 AAATGCTTCCGGAGAAACAGTCAGCCGTGTAACGAATGATACGATGGTGG    400
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU34820___bm    351 AAATGCTTCCGGAGAAACAGTCAGCCGTGTAACGAACGATACGATGGTGG    400

BSNT_05300___    401 TCAAAGAACTGATTACAACCCACATCAGCGGGTTTATTACAGGCATCATT    450
                     ||||||||.|||||||||||||.||||||||.||||||||||||||||||
BSU34820___bm    401 TCAAAGAATTGATTACAACCCATATCAGCGGATTTATTACAGGCATCATT    450

BSNT_05300___    451 TCTGTCATTGGATCATTGACAATCTTGTTTATTATGAACTGGAAGCTGAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34820___bm    451 TCTGTCATTGGATCATTGACAATCTTGTTTATTATGAACTGGAAGCTGAC    500

BSNT_05300___    501 ACTGCTTGTGTTAGTGGTTGTTCCGCTGGCCGCTCTTATTTTGGTGCCGA    550
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU34820___bm    501 ACTGCTTGTGTTAGTGGTCGTTCCGCTGGCCGCTCTTATTTTGGTGCCGA    550

BSNT_05300___    551 TTGGACGGAAAATGTTCTCCATTTCACGGGAAACGCAAGATGAAACGGCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34820___bm    551 TTGGACGGAAAATGTTCTCCATTTCACGGGAAACGCAAGATGAAACGGCT    600

BSNT_05300___    601 CGTTTTACAGGCCTGCTGAATCAAATTCTCCCGGAAATCAGACTCGTCAA    650
                     |||||||||||||||||.||||||||||||||||||||||||||.||.||
BSU34820___bm    601 CGTTTTACAGGCCTGCTTAATCAAATTCTCCCGGAAATCAGACTTGTTAA    650

BSNT_05300___    651 GGCTTCAAATGCGGAGGATGTCGAATATGGTCGCGGGAAGATGGGGATTT    700
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU34820___bm    651 GGCTTCAAATGCGGAGGATGTCGAATATGGGCGCGGGAAGATGGGGATTT    700

BSNT_05300___    701 CCTCATTATTTAAGCTTGGCGTTCGTGAAGCCAAGGTTCAATCGCTTGTC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34820___bm    701 CCTCATTATTTAAGCTTGGCGTTCGTGAAGCCAAGGTTCAATCGCTTGTC    750

BSNT_05300___    751 GGCCCGCTTATTTCACTCGTGTTAATGGCAGCGCTTGTCGCAGTGATCGG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34820___bm    751 GGCCCGCTTATTTCACTCGTGTTAATGGCAGCGCTTGTCGCAGTGATCGG    800

BSNT_05300___    801 ATATGGCGGCATGCAGGTCTCATCAGGCGAGCTCACAGCCGGAGCGCTCG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34820___bm    801 ATATGGCGGCATGCAGGTCTCATCAGGCGAGCTCACAGCCGGAGCGCTCG    850

BSNT_05300___    851 TGGCTTTTATTTTATATTTATTTCAAATTATTATGCCGATGGGCCAGATT    900
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU34820___bm    851 TGGCTTTTATTTTATATTTGTTTCAAATTATTATGCCGATGGGCCAGATT    900

BSNT_05300___    901 ACAACGTTTTTCACACAGCTGCAAAAATCAATCGGTGCAACAGAACGAAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34820___bm    901 ACAACGTTTTTCACACAGCTGCAAAAATCAATCGGTGCAACAGAACGAAT    950

BSNT_05300___    951 GATTGAGATTTTGGCAGAGGAAGAGGAAGATACAGTGACAGGAAAACAAA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34820___bm    951 GATTGAGATTTTGGCAGAGGAAGAGGAAGATACAGTGACAGGAAAACAAA   1000

BSNT_05300___   1001 TTGAAAATGCGCATCTGCCTATCCAGCTTGATCGCGTGTCTTTTGGATAT   1050
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU34820___bm   1001 TTGAAAATGCACATCTGCCTATCCAGCTTGATCGCGTGTCTTTTGGATAT   1050

BSNT_05300___   1051 AAGCCTGATCAGCTGATCTTAAAAGAGGTCAGCGCTGTCATTGAAGCAGG   1100
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU34820___bm   1051 AAGCCTGATCAGCTGATCTTAAAAGAGGTCAGCGCCGTCATTGAAGCAGG   1100

BSNT_05300___   1101 TAAAGTCACAGCGATTGTCGGTCCGAGCGGCGGGGGGAAAACGACGCTGT   1150
                     .|||||.||||||||.||||||||||||||||||||.|||||||||||||
BSU34820___bm   1101 GAAAGTGACAGCGATCGTCGGTCCGAGCGGCGGGGGAAAAACGACGCTGT   1150

BSNT_05300___   1151 TTAAGCTGCTTGAACGTTTTTATTCTCCGACTGCAGGGTCCATTCGGCTG   1200
                     ||||||||||||||||.|||||||||||||||||||||.|||||||||||
BSU34820___bm   1151 TTAAGCTGCTTGAACGCTTTTATTCTCCGACTGCAGGGACCATTCGGCTG   1200

BSNT_05300___   1201 GGGGACGAGCCGATTGATACTTATTCGCTTGAATCATGGCGGGAGCACAT   1250
                     ||||||||||||.|.||||||||.|||||||||||.|||.|||||||.||
BSU34820___bm   1201 GGGGACGAGCCGGTCGATACTTACTCGCTTGAATCGTGGAGGGAGCATAT   1250

BSNT_05300___   1251 CGGGTATGTATCACAGGAAAGCCCGTTAATGTCCGGGACAATCAGAGAAA   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34820___bm   1251 CGGGTATGTATCACAGGAAAGCCCGTTAATGTCCGGGACAATCAGAGAAA   1300

BSNT_05300___   1301 ATATTTGCTACGGGTTAGAACGTGATGTGACGGATGCTGAGATCGAAAAA   1350
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU34820___bm   1301 ATATTTGCTACGGGTTAGAACGAGATGTGACGGATGCTGAGATCGAAAAA   1350

BSNT_05300___   1351 GCCGCGGAGATGGCATATGCGCTCAATTTTATAAAGGAGCTGCCGAATCA   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34820___bm   1351 GCCGCGGAGATGGCATATGCGCTCAATTTTATAAAGGAGCTGCCGAATCA   1400

BSNT_05300___   1401 GTTTGATACAGAAGTAGGCGAACGCGGCATTATGCTGTCAGGCGGACAAA   1450
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU34820___bm   1401 GTTTGATACAGAAGTGGGCGAACGCGGCATTATGCTGTCAGGCGGACAAA   1450

BSNT_05300___   1451 GGCAAAGAATCGCGATTGCGAGAGCACTTCTCCGTAACCCAAGCATTCTT   1500
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU34820___bm   1451 GGCAAAGAATCGCGATTGCGAGAGCGCTTCTCCGTAACCCAAGCATTCTT   1500

BSNT_05300___   1501 ATGCTCGATGAAGCTACCTCAAGTCTCGACAGCCAATCTGAAAAATCAGT   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34820___bm   1501 ATGCTCGATGAAGCTACCTCAAGTCTCGACAGCCAATCTGAAAAATCAGT   1550

BSNT_05300___   1551 TCAGCAGGCGCTGGAGGTGCTGATGGAAGGCCGCACAACGATTGTTATCG   1600
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU34820___bm   1551 TCAGCAGGCGCTGGAGGTGCTGATGGAGGGCCGCACAACGATTGTTATCG   1600

BSNT_05300___   1601 CTCACCGCCTATCTACCGTTGTAGATGCGGACCAGCTTTTGTTTGTTGAA   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34820___bm   1601 CTCACCGCCTATCTACCGTTGTAGATGCGGACCAGCTTTTGTTTGTTGAA   1650

BSNT_05300___   1651 AAAGGGGAAATTACCGGTCGTGGAACACACCATGAGTTAATGGCTTCCCA   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34820___bm   1651 AAAGGGGAAATTACCGGTCGTGGAACACACCATGAGTTAATGGCTTCCCA   1700

BSNT_05300___   1701 TGGCCTTTATCGGGATTTTGCTGAACAGCAGCTGAAAATGAATGCAGACT   1750
                     |||||||||.|||||||||||||||||||||||||||||||||||.||||
BSU34820___bm   1701 TGGCCTTTACCGGGATTTTGCTGAACAGCAGCTGAAAATGAATGCGGACT   1750

BSNT_05300___   1751 TAGAAAACAAAGCCGGGTAA   1770
                     ||||||||||||||||||||
BSU34820___bm   1751 TAGAAAACAAAGCCGGGTAA   1770


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