Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05302 and BSU34840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:01
# Commandline: needle
# -asequence dna-align/BSNT_05302___yvcB.1.22522.seq
# -bsequence dna-align/BSU34840___yvcB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05302___yvcB-BSU34840___yvcB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05302___yvcB-BSU34840___yvcB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05302___yvcB
# 2: BSU34840___yvcB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1934
# Identity: 1721/1934 (89.0%)
# Similarity: 1721/1934 (89.0%)
# Gaps: 49/1934 ( 2.5%)
# Score: 7772.5
#
#
#=======================================
BSNT_05302___ 1 ATGGAAAATAAGAATATATTTGAAAATGAAAATGTAAAGCTGCGTTTAAT 50
||||.||||||.|||.|||||||.|||||.||.||||||.|..|.|||||
BSU34840___yv 1 ATGGGAAATAAAAATGTATTTGAGAATGAGAACGTAAAGTTAAGGTTAAT 50
BSNT_05302___ 51 TGATTTGGAGTACGATTATAAAGAAAAATTCGCTTCTAATATTGAAAGTG 100
||||||.||.||.||.||||||.||||.||.||.||.|.|||||..||||
BSU34840___yv 51 TGATTTAGAATATGACTATAAACAAAAGTTTGCCTCAACTATTGCGAGTG 100
BSNT_05302___ 101 AAATAAAGAGAGCTAAAACAGATTTTGAAGTCGAGGTGCGTCGAATATAC 150
||.|.||||.||||||.|..|||||.||||..||..|.||..||||.||.
BSU34840___yv 101 AAGTTAAGAAAGCTAAGAAGGATTTCGAAGCAGATATACGCAGAATTTAT 150
BSNT_05302___ 151 AAAGAAGAAACACATCGAGATCTTCCAAAAAATCTG------GAAATATA 194
|||||.|||||.||.|..||||||||..|.|||.|| |||||.||
BSU34840___yv 151 AAAGAGGAAACCCACCACGATCTTCCTGAGAATATGAAAATTGAAATTTA 200
BSNT_05302___ 195 CACATCTAATGAACTTATTAAAAAAAATTCGAAAATAGATACA----TCA 240
|||.||.|||||||||.|.||..|.|||.| ||.| ||||| ||.
BSU34840___yv 201 CACCTCCAATGAACTTGTAAATCAGAATAC--AAGT--ATACAAAGTTCG 246
BSNT_05302___ 241 ATAAGAGAGTCCGGATATGATGGTACAGCTATTTATATTAAGGATGATAA 290
|..|||||.||.||.||.|||||.||.||.||..||||.|..|||||.||
BSU34840___yv 247 ACCAGAGAATCAGGTTACGATGGAACGGCAATCCATATAATAGATGAGAA 296
BSNT_05302___ 291 ACAACACGTTAATCAACTTCATATTATTTCAGAGGGGAGTGCTGATAACG 340
|.||||..||.||||.|||||.|||||||||||.||.|||||.|||||..
BSU34840___yv 297 AAAACATATTGATCAGCTTCAGATTATTTCAGAAGGTAGTGCCGATAATA 346
BSNT_05302___ 341 AAGACTGGTCATACAATTTCTTTGGTCTCTTTTTAGGGATAGATGACAGC 390
|.||.||||||||.||.||.||||||||.||||||||.||.|||.|.||.
BSU34840___yv 347 AGGATTGGTCATATAACTTTTTTGGTCTTTTTTTAGGAATTGATCATAGT 396
BSNT_05302___ 391 CAGTACCAAGCGACAAAAGAGTTT-GTAAGAAATGCCAAAAGAGAAACAG 439
|||||..|.||.|||||.|||||| .|||.||| ||.||.|.||.|.|||
BSU34840___yv 397 CAGTATGAGGCTACAAAGGAGTTTACTAACAAA-GCAAAGAAAGCAGCAG 445
BSNT_05302___ 440 AGAATTCTAATGATTTAAAGACCTTTGCTATGGGGCACTCACTGGCAAAT 489
..||.|||.|.||||||||.||.||.||..|.||.||.|||||.||||||
BSU34840___yv 446 GTAACTCTGAGGATTTAAAAACATTCGCCTTAGGACATTCACTTGCAAAT 495
BSNT_05302___ 490 AATAATCAGGTGATGGTTCAATTAATTGACGGAGAATTTGATGAAGTTTA 539
|||||.||.||.|||||.|||||.|||||.|||||||.||||||||||||
BSU34840___yv 496 AATAACCAAGTTATGGTGCAATTGATTGATGGAGAATATGATGAAGTTTA 545
BSNT_05302___ 540 TGGGGTTAACGGAGCTCA----AATAAGCGTTGACCACCTACTAGCAACT 585
||||||.||.|||||||| |||| ||||.||..||||.|.||||
BSU34840___yv 546 TGGGGTAAATGGAGCTCAAGTCAATA----TTGATCAATTACTTGAAACT 591
BSNT_05302___ 586 GATTTGAA---TTTGAGAGATAGGTTA--ATGCATAAATTTCATA-TTAG 629
|| |||| ||..|.|||||.|||| |.| ||||| || |||
BSU34840___yv 592 GA--TGAAAGTTTATATAGATATGTTATTAGG---AAATT---TAGTTA- 632
BSNT_05302___ 630 ACGCTTAA-----AAGATATTAATGATATCCCGCCAGAAAAGTTAAAAAA 674
||| |||||||..||...|||||||||||||||||||||||
BSU34840___yv 633 -----TAAATATGAAGATATAGATTCCATCCCGCCAGAAAAGTTAAAAAA 677
BSNT_05302___ 675 AGAAATCCAAAAATATTATGAAGACAAAGGCGTGACAGCAAACATCACCC 724
|||||||||||||||||||||||||||||||||.|||.||||||||||.|
BSU34840___yv 678 AGAAATCCAAAAATATTATGAAGACAAAGGCGTAACAACAAACATCACTC 727
BSNT_05302___ 725 AACGCATCTCAAAAGATGACCCGCTGTATGGAGTCAGCGGCAAGGCCGAT 774
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU34840___yv 728 AGCGCATCTCAAAAGATGACCCGCTGTATGGAGTCAGCGGCAAGGCCGAT 777
BSNT_05302___ 775 TTCATTACATTCGGTGATGTGAAGATGGCAGATACAAATACAAGTGTAAA 824
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU34840___yv 778 TTTATTACATTCGGTGATGTGAAGATGGCAGATACAAATACAAGTGTAAA 827
BSNT_05302___ 825 AGGCATCCGAAATATTATGGATGGGGTTCCTGACGAAGATGTGAGGTCAA 874
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU34840___yv 828 AGGCATCCGAAACATTATGGATGGGGTTCCTGACGAAGATGTGAGGTCAA 877
BSNT_05302___ 875 TTCAAAAATTCCTTCAAAAATATAAGGATGACTATGAAAAAGACGGCTTG 924
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34840___yv 878 TTCAAAAATTCCTTCAAAAATATAAGGATGACTATGAAAAAGACGGCTTG 927
BSNT_05302___ 925 AACGGTTTTATAAAGGCAGCCAGCGGGATAGACATAGACCTGATTGAAAA 974
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34840___yv 928 AACGGTTTTATAAAGGCAGCCAGCGGGATAGACATAGACCTGATTGAAAA 977
BSNT_05302___ 975 AGTGAAAAACACAGACGGCGCTTTAAAGAAAGTAAGTGTCCTATATGAGC 1024
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34840___yv 978 AGTGAAAAACACAGACGGCGCTTTAAAGAAAGTAAGTGTCCTATATGAGC 1027
BSNT_05302___ 1025 ATTTTGATGATGTTAAGCAAATGTATGGCCGAATAAAAGAAGAACTGCCT 1074
||||||||||||||||||||||||||||||||||||||||.||||||||.
BSU34840___yv 1028 ATTTTGATGATGTTAAGCAAATGTATGGCCGAATAAAAGAGGAACTGCCG 1077
BSNT_05302___ 1075 TCATTTTTAGGTTTTCTTCATACCTTGTTGAGAAACAGCGGACCGGTCGT 1124
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU34840___yv 1078 TCGTTTTTAGGTTTTCTTCATACCTTGTTGAGAAACAGCGGACCGGTCGT 1127
BSNT_05302___ 1125 AGATCAGTTAGCTGAAAATGGTTATATTGATGAAACGCAAAAGAAAGTCA 1174
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34840___yv 1128 AGATCAGTTAGCTGAAAATGGTTATATTGATGAAACGCAAAAGAAAGTCA 1177
BSNT_05302___ 1175 TCAAAAAAGAATTAACGAATATTAATGCGAGTATGCGAGGCATAGAATCA 1224
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU34840___yv 1178 TCAAAAAAGAATTAACGAATATTAATGCGAGTATGCGAGGCATAGAGTCA 1227
BSNT_05302___ 1225 CGGTACGAACATTTCATTGACCATCTAAAGCATGGCCAATTTATGCAAGC 1274
|||||||||||||||||.|||||||||||.||||||||||||||||||||
BSU34840___yv 1228 CGGTACGAACATTTCATAGACCATCTAAAACATGGCCAATTTATGCAAGC 1277
BSNT_05302___ 1275 TTTAAAAGACGTTGGTGAAATAGTGGACTACGTAAAATCAATTCTGTCCT 1324
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU34840___yv 1278 TTTAAAAGACGTTGGTGAAATAGTGGACTATGTAAAATCAATTCTGTCCT 1327
BSNT_05302___ 1325 CATTGAAAACACTCGACACAGAAACAAAAGACGCACTAAAACTTATCGTC 1374
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34840___yv 1328 CATTGAAAACACTCGACACAGAAACAAAAGACGCACTAAAACTTATCGTC 1377
BSNT_05302___ 1375 GACGGCCACAGCATCGTTCAAATGCTCAACGCCTTGTCGAAGGAAAAAGG 1424
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU34840___yv 1378 GACGGCCACAGCATCGTTCAAATGCTCAACGCCTTGTCAAAGGAAAAAGG 1427
BSNT_05302___ 1425 CTTCAGCTATAAAGGCTCCGATATTTATTTTACAGGCAAGAGCGGCTCGG 1474
||||||||||||||||||||||||||||||||||||.|||||.|||||||
BSU34840___yv 1428 CTTCAGCTATAAAGGCTCCGATATTTATTTTACAGGGAAGAGTGGCTCGG 1477
BSNT_05302___ 1475 GAGAAACGATTCAAGTCAATCTCTCATCCGCTGTCAGAATCTATCAAAAC 1524
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34840___yv 1478 GAGAAACGATTCAAGTCAATCTCTCATCCGCTGTCAGAATCTATCAAAAC 1527
BSNT_05302___ 1525 GGTATGAAAATCGTTGAAGATATGGAAGATGCGATTTCTAAGTACCAGAA 1574
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34840___yv 1528 GGTATGAAAATCGTTGAAGATATGGAAGATGCGATTTCTAAGTACCAGAA 1577
BSNT_05302___ 1575 GGTTTACAGTCAGGAAATCGATGAAGATTTCATAGACAAAAAGCAGGCGA 1624
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU34840___yv 1578 GGTTTACAGTCAGGAAATCGATGAAGACTTCATAGACAAAAAGCAGGCGA 1627
BSNT_05302___ 1625 TCATCACGGCTATTCATCATATGGAAGAAAACCCTTCGCATTATGCCTTC 1674
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34840___yv 1628 TCATCACGGCTATTCATCATATGGAAGAAAACCCTTCGCATTATGCCTTC 1677
BSNT_05302___ 1675 GATCTTCAATTCCGGCTTGCAGCTGGTTTCAGCCACACATTCGATAAATT 1724
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34840___yv 1678 GATCTTCAATTCCGGCTTGCAGCTGGTTTCAGCCACACATTCGATAAATT 1727
BSNT_05302___ 1725 GGAGAAAATCTCTGTTCATGAATCATTCCACACAGGTGCGCTTCCTGCAA 1774
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU34840___yv 1728 GGAGAAAATCTCAGTTCATGAATCATTCCACACAGGTGCGCTTCCTGCAA 1777
BSNT_05302___ 1775 ATGATGGAATTGTTGCTGAATTAAAAAAACAGACAACAGAAAAAAGAGAT 1824
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34840___yv 1778 ATGATGGAATTGTTGCTGAATTAAAAAAACAGACAACAGAAAAAAGAGAT 1827
BSNT_05302___ 1825 TTTATCAAAAATATCCGCGAGAGTATTGAAAAGCTGTTTGAAAAAGAAGA 1874
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34840___yv 1828 TTTATCAAAAATATCCGCGAGAGTATTGAAAAGCTGTTTGAAAAAGAAGA 1877
BSNT_05302___ 1875 AATGATTTCTCAGTTATTTGATTTTCAGCCTTAG 1908
||||||||||||||||||||||||||||.|||||
BSU34840___yv 1878 AATGATTTCTCAGTTATTTGATTTTCAGTCTTAG 1911
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