Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05303 and BSU34850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:01
# Commandline: needle
# -asequence dna-align/BSNT_05303___yvcA.1.22522.seq
# -bsequence dna-align/BSU34850___yvcA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05303___yvcA-BSU34850___yvcA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05303___yvcA-BSU34850___yvcA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05303___yvcA
# 2: BSU34850___yvcA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 758
# Identity: 587/758 (77.4%)
# Similarity: 587/758 (77.4%)
# Gaps: 67/758 ( 8.8%)
# Score: 2286.0
#
#
#=======================================
BSNT_05303___ 1 ATGAAAAAGATCATCTTTATTTGCTTCAGCTTATTACTTGCCCTGACAGG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34850___yv 1 ATGAAAAAGATCATCTTTATTTGCTTCAGCTTATTACTTGCCCTGACAGG 50
BSNT_05303___ 51 AGGATGCAGTATGAAAGACAATGATAAAAACAGCACAAATGACAATAAAA 100
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU34850___yv 51 AGGATGCAGTATGAATGACAATGATAAAAACAGCACAAATGACAATAAAA 100
BSNT_05303___ 101 CAGAAGCGGTAAAACCAAAAGACATGGATCCCAAGGATCTGCCTCAAGTA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34850___yv 101 CAGAAGCGGTAAAACCAAAAGACATGGATCCCAAGGATCTGCCTCAAGTA 150
BSNT_05303___ 151 CCTGCGTTTCAGGACGAGAAAACGAGAGAGTACATGGTGTCAACAAAAGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34850___yv 151 CCTGCGTTTCAGGACGAGAAAACGAGAGAGTACATGGTGTCAACAAAAGA 200
BSNT_05303___ 201 AGAGGAACCAGGATATTATTTGCTGGAATCTAAGCTGAAAGGGTTTAGGA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34850___yv 201 AGAGGAACCAGGATATTATTTGCTGGAATCTAAGCTGAAAGGGTTTAGGA 250
BSNT_05303___ 251 TGTTGTTTCCGGAGGATGGGGAGTATGTACCTGATCTTTCAAGTAAA--- 297
|||||||||||||||||||..||| ||||.|||||.|.|
BSU34850___yv 251 TGTTGTTTCCGGAGGATGGAAAGT---------ATCTATCAAGAAGATCA 291
BSNT_05303___ 298 ---------GGTGAAAATGAGGAAACAATAGTATTTGATAGTTTCAATAA 338
||..||||..|.||||..||.|.||||.||||||...||||
BSU34850___yv 292 TCGTTAACCGGGAAAAACAAAGAAAGTATTGGATTTAATAGTTATGATAA 341
BSNT_05303___ 339 AAAAACTAACATTCAA--TATGACGGGCAATTAGATTATCATCAAGAAAA 386
|.|.||.| ||..|| |.|||.||.||..||...|||.|..|||||.|
BSU34850___yv 342 AGACACCA--ATGTAATGTTTGATGGCCATGTAACATATTACAAAGAAGA 389
BSNT_05303___ 387 AAGTTTTGCGAATGA---CAAGGATACAATGCTTGACATTGTAAGTGGCA 433
||||||||||||||| .||| ||||||||.||.|||||.|||||.|
BSU34850___yv 390 AAGTTTTGCGAATGAACCTAAG---ACAATGCTAGATATTGTTAGTGGAA 436
BSNT_05303___ 434 GAAATAGCTATAAAGGAAAATACGAAGAAAGAGAGCTATCTGATA-AAAT 482
.||||...||||||||..|||||.||.|||| .|||.| |.| |||.
BSU34850___yv 437 AAAATGATTATAAAGGCGAATACAAAAAAAG-CAGCAA----AAAGAAAA 481
BSNT_05303___ 483 TGTATATT----CTGCTCAAAAGAAAAG-CAGTTTTGATGATGTGGAT-G 526
.|.||||| |||| |||.|.||||| ||..|||||.|||.|.||| |
BSU34850___yv 482 CGGATATTTACACTGC-CAAGAAAAAAGACATCTTTGACGATATTGATAG 530
BSNT_05303___ 527 AAAAGAATAATTTTTCTTATAGATTTTTTGGTTATGTTAAATCTAAAAAA 576
|||| .||||||.|||.||.||.|.||||||.||||||||.||| |.|
BSU34850___yv 531 AAAA-TATAATTATTCATACAGTTATTTTGGATATGTTAAGTCT---ACA 576
BSNT_05303___ 577 GAGGAATAT---TTAGGAATAGAGTATTCTTTTCGTTTTT---CT----T 616
||||||.|| .|||||.||||.|| ||..||| || |
BSU34850___yv 577 GAGGAAGATAACCTAGGAGTAGAATA-------CGCCTTTACCCTTGGAT 619
BSNT_05303___ 617 GCTATAAGGGTAAAGAGGTTTGTTCATTAAAGAAAGAAGAAGCAGAAAAA 666
||.|.||.|..||..|....||.||.|||.|..|||||.|.||..||||.
BSU34850___yv 620 GCAAAAATGAAAATCAACCATGCTCCTTAGATGAAGAAAAGGCTAAAAAT 669
BSNT_05303___ 667 AAAGTTCGA-AAAATAATTGATTCTATTACCTTTTTAAAAGTTAAAAAGG 715
|||||| || |||.|||||.|||||||.||||||||||.||.||||||||
BSU34850___yv 670 AAAGTT-GAGAAATTAATTAATTCTATCACCTTTTTAATAGATAAAAAGG 718
BSNT_05303___ 716 AGAAATAG 723
|||||||.
BSU34850___yv 719 AGAAATAA 726
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