Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05308 and BSU34890

See Amino acid alignment / Visit BSNT_05308 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence dna-align/BSNT_05308___hisH.1.22522.seq
#    -bsequence dna-align/BSU34890___hisH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05308___hisH-BSU34890___hisH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05308___hisH-BSU34890___hisH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05308___hisH
# 2: BSU34890___hisH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity:     628/639 (98.3%)
# Similarity:   628/639 (98.3%)
# Gaps:           0/639 ( 0.0%)
# Score: 3096.0
# 
#
#=======================================

BSNT_05308___      1 ATGATCGGCGTGATAGATTACGGAATGGGGAATTTATACAGTGTCTCAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34890___hi      1 ATGATCGGCGTGATAGATTACGGAATGGGGAATTTATACAGTGTCTCAAA     50

BSNT_05308___     51 GGCGCTTGAACGTGTCGGCGTGCCGTATTTTGTTTCTGAAAAGCCGGAGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34890___hi     51 GGCGCTTGAACGTGTCGGCGTGCCGTATTTTGTTTCTGAAAAGCCGGAGG    100

BSNT_05308___    101 AGCTGAAAGAAGCTGATGCCTTCATTTTGCCGGGAGTCGGTTCATTTGGA    150
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU34890___hi    101 AGCTGAAAGAAGCTGATGCTTTCATTTTGCCGGGAGTCGGTTCATTTGGA    150

BSNT_05308___    151 GACGCGATGGACAATTTGCGCTACACGAAGCTTGATCAATTGATTCACGA    200
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU34890___hi    151 GACGCGATGGACAATTTGGGCTACACGAAGCTTGATCAATTGATTCACGA    200

BSNT_05308___    201 TATGGTCTCAGAGGGAAGGCTGCTTCTAGGGATCTGCCTCGGCATGCAGC    250
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU34890___hi    201 TATGGTCTCAGAGGGAAGGCTGCTTCTCGGGATCTGCCTCGGCATGCAGC    250

BSNT_05308___    251 TTTTATTTGAAGAAAGCGAAGAAAACGGCACCGCTTCAGGACTCGGGCTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34890___hi    251 TTTTATTTGAAGAAAGCGAAGAAAACGGCACCGCTTCAGGACTCGGGCTG    300

BSNT_05308___    301 TTAAAAGGAAAAGCAGTCAGGCTGAAAGCAGAAGATGAAAAAGGAAACAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34890___hi    301 TTAAAAGGAAAAGCAGTCAGGCTGAAAGCAGAAGATGAAAAAGGAAACAA    350

BSNT_05308___    351 GCTGAAGGTTCCGCATATGGGCTGGAATCGTCTTTCCTTTCATAACGAAT    400
                     ||||||||||||||||||||||||||||||||||||.||||||||.||||
BSU34890___hi    351 GCTGAAGGTTCCGCATATGGGCTGGAATCGTCTTTCTTTTCATAATGAAT    400

BSNT_05308___    401 CTCCGCTGCTGACTAAAACAGAACAAGGCTACGCTTACTTCGTTCATTCC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34890___hi    401 CTCCGCTGCTGACTAAAACAGAACAAGGCTACGCTTACTTCGTTCATTCC    450

BSNT_05308___    451 TATTACATTGACGGGATGGAGGAGGACTCGCTCCTGGCAAGCACCGATTA    500
                     ||||||||||||||||||||||||.||.||||.|||||||||.|||||||
BSU34890___hi    451 TATTACATTGACGGGATGGAGGAGAACGCGCTTCTGGCAAGCGCCGATTA    500

BSNT_05308___    501 TGGTGTGCGAGTGCCTGCTGTAGTCGGAAAAAGAAACGTCTTCGGCGCCC    550
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU34890___hi    501 TGGTGTACGAGTGCCTGCTGTAGTCGGAAAAAGAAACGTCTTCGGCGCCC    550

BSNT_05308___    551 AATTTCATCCGGAAAAAAGCAGCACGGTCGGAATGTCTATTTTAACCCAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34890___hi    551 AATTTCATCCGGAAAAAAGCAGCACGGTCGGAATGTCTATTTTAACCCAA    600

BSNT_05308___    601 TTTACGAAAATGGCAGCAAAACAGAAGGTGAAAAAATGA    639
                     ||||||||||||||||||.||||||||||||||||||||
BSU34890___hi    601 TTTACGAAAATGGCAGCAGAACAGAAGGTGAAAAAATGA    639


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