Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05309 and BSU34900

See Amino acid alignment / Visit BSNT_05309 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence dna-align/BSNT_05309___hisB.1.22522.seq
#    -bsequence dna-align/BSU34900___hisB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05309___hisB-BSU34900___hisB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05309___hisB-BSU34900___hisB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05309___hisB
# 2: BSU34900___hisB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 585
# Identity:     576/585 (98.5%)
# Similarity:   576/585 (98.5%)
# Gaps:           0/585 ( 0.0%)
# Score: 2844.0
# 
#
#=======================================

BSNT_05309___      1 ATGAGAAAAGCGGAACGCGTCAGGAAAACAAACGAAACAGATATTGAGCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34900___hi      1 ATGAGAAAAGCGGAACGCGTCAGGAAAACAAACGAAACAGATATTGAGCT     50

BSNT_05309___     51 GGCATTTACAATAGACGGCGGGGGACAAGCGGATATCAAAACAGATGTGC    100
                     |||||||||||||||||||||.||||||||||||||.|||||||||||||
BSU34900___hi     51 GGCATTTACAATAGACGGCGGAGGACAAGCGGATATTAAAACAGATGTGC    100

BSNT_05309___    101 CGTTTATGACACATATGTTGGATTTATTCACGAAACACGGCCAATTCGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU34900___hi    101 CGTTTATGACACATATGTTGGATTTATTCACGAAACACGGCCAATTTGAT    150

BSNT_05309___    151 CTTTCCATTAACGCAAAAGGCGATGTTGATATAGATGATCACCACACGAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34900___hi    151 CTTTCCATTAACGCAAAAGGCGATGTTGATATAGATGATCACCACACGAC    200

BSNT_05309___    201 TGAAGATATCGGCATCTGCTTAGGGCAGGCGCTGCTCGAAGCGTTGGGCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34900___hi    201 TGAAGATATCGGCATCTGCTTAGGGCAGGCGCTGCTCGAAGCGTTGGGCG    250

BSNT_05309___    251 ATAAAAAAGGAATCAAACGCTACGGATCGGCGTTTGTGCCGATGGATGAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34900___hi    251 ATAAAAAAGGAATCAAACGCTACGGATCGGCGTTTGTGCCGATGGATGAG    300

BSNT_05309___    301 GCACTTGCTCAAGTTGTGATTGATTTAAGCAACCGGCCGCACTTAGAAAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34900___hi    301 GCACTTGCTCAAGTTGTGATTGATTTAAGCAACCGGCCGCACTTAGAAAT    350

BSNT_05309___    351 GCGCGTTGATTTCCCGGCTGCTAAAGTCGGAACTTTCGATACGGAGCTTG    400
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU34900___hi    351 GCGCGCTGATTTCCCGGCTGCTAAAGTCGGAACTTTCGATACGGAGCTTG    400

BSNT_05309___    401 TACATGAATTTTTGTGGAAGCTTGCGCTCGAAGCCCGGATGAACCTGCAC    450
                     ||||||||||||||||||||||.|||||||||||.||.||||||||||||
BSU34900___hi    401 TACATGAATTTTTGTGGAAGCTGGCGCTCGAAGCTCGAATGAACCTGCAC    450

BSNT_05309___    451 GTCATCGTTCATTATGGCACAAATACCCACCACATGATTGAAGCCGTTTT    500
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU34900___hi    451 GTCATCGTTCATTATGGAACAAATACCCACCACATGATTGAAGCCGTTTT    500

BSNT_05309___    501 TAAAGCGCTGGGACGTGCGCTTGATGAAGCGACAACGATCGATCCGCGAG    550
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU34900___hi    501 TAAAGCACTGGGACGTGCGCTTGATGAAGCGACAACGATCGATCCGCGAG    550

BSNT_05309___    551 TTAAAGGAATACCGTCAACGAAAGGGATGCTGTAA    585
                     |||||||||||||||||||||||||||||||||||
BSU34900___hi    551 TTAAAGGAATACCGTCAACGAAAGGGATGCTGTAA    585


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