Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05323 and BSU34960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:03
# Commandline: needle
# -asequence dna-align/BSNT_05323.1.22522.seq
# -bsequence dna-align/BSU34960___yvoF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05323-BSU34960___yvoF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05323-BSU34960___yvoF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05323
# 2: BSU34960___yvoF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 519
# Identity: 309/519 (59.5%)
# Similarity: 309/519 (59.5%)
# Gaps: 207/519 (39.9%)
# Score: 1517.0
#
#
#=======================================
BSNT_05323 1 GTGAGAAAAACAGATCGTCATCCGGTCTCGGGGGCCAACTCACTGTGGCA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34960___yv 1 GTGAGAAAAACAGATCGTCATCCGGTCTCGGGGGCCAACTCACTGTGGCA 50
BSNT_05323 51 TGTCTATCAAACGGTACCTTTTTTAAAGGTCGTCAAAAATTTCATTGTCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34960___yv 51 TGTCTATCAAACGGTACCTTTTTTAAAGGTCGTCAAAAATTTCATTGTCA 100
BSNT_05323 101 TTCAAATTGCGAGATATACGCCGTTTATAGGGATGAAAAACTGGCTGTAC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34960___yv 101 TTCAAATTGCGAGATATACGCCGTTTATAGGGATGAAAAACTGGCTGTAC 150
BSNT_05323 151 CGTACATTTCTGCGGATGAAGGTTGGAAATCAGACATCCTTTGCCCTCAT 200
||.||||||||||||||||||||||||||.||||||||||||||||||||
BSU34960___yv 151 CGCACATTTCTGCGGATGAAGGTTGGAAAACAGACATCCTTTGCCCTCAT 200
BSNT_05323 201 GGTGATGCCAGATATCATGTTTCCGGAAAAGATCTCAGTCGGAACAAATA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34960___yv 201 GGTGATGCCAGATATCATGTTTCCGGAAAAGATCTCAGTCGGAACAAATA 250
BSNT_05323 251 CAATCATCGGGTACAATACGACCATTCTGGCCCATGAGTATT-------- 292
||||||||||||||||||||||||||||||||||||||||||
BSU34960___yv 251 CAATCATCGGGTACAATACGACCATTCTGGCCCATGAGTATTTGATTCAC 300
BSNT_05323 293 -----CCGGATCGGCACAGTTCTGA------------------------- 312
|||||||||||.||||||||
BSU34960___yv 301 GAATACCGGATCGGCAAAGTTCTGATCGGGGACGAAGTGATGATTGGTGC 350
BSNT_05323 312 -------------------------------------------------- 312
BSU34960___yv 351 CAACACGACCATTCTGCCCGGGGTGAAAATAGGAGATGGCGCAGTTGTGT 400
BSNT_05323 312 -------------------------------------------------- 312
BSU34960___yv 401 CCGCCGGAACGCTTGTCCATAAGGATGTGCCTGACGGGGCATTTGTCGGC 450
BSNT_05323 312 -------------------------------------------------- 312
BSU34960___yv 451 GGAAATCCGATGAGGATCATCTATACGAAGGAAGAAATGCAAGAAAGATT 500
BSNT_05323 312 ------------------- 312
BSU34960___yv 501 GAAAAAGTCCGCTGAATAA 519
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