Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05330 and BSU35020

See Amino acid alignment / Visit BSNT_05330 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:04
# Commandline: needle
#    -asequence dna-align/BSNT_05330___nagB.1.22522.seq
#    -bsequence dna-align/BSU35020___nagBA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05330___nagB-BSU35020___nagBA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05330___nagB-BSU35020___nagBA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05330___nagB
# 2: BSU35020___nagBA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 729
# Identity:     711/729 (97.5%)
# Similarity:   711/729 (97.5%)
# Gaps:           0/729 ( 0.0%)
# Score: 3483.0
# 
#
#=======================================

BSNT_05330___      1 ATGAAAGTAATGGAATGTCAAACGTATGAAGAGCTAAGCCAAAAAGCAGC     50
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU35020___na      1 ATGAAAGTAATGGAATGTCAAACGTATGAAGAGCTAAGCCAAATAGCAGC     50

BSNT_05330___     51 CAGAATAACGGCAGATACAATCAAAGAAAAACCTGATGCCGTTCTCGGGT    100
                     |||||||||||||||||||||||||||||||||||||||.||||||||.|
BSU35020___na     51 CAGAATAACGGCAGATACAATCAAAGAAAAACCTGATGCTGTTCTCGGTT    100

BSNT_05330___    101 TAGCGACAGGCGGCACACCGGAAGGCACGTATCGCGAGCTGATCCGCCTG    150
                     |||||||.|||||||||||||||||||||||||||.||||||||||||||
BSU35020___na    101 TAGCGACGGGCGGCACACCGGAAGGCACGTATCGCCAGCTGATCCGCCTG    150

BSNT_05330___    151 CACCAAACTGAGAATCTCTCATTTCAAAACATCACTACAGTTAATTTGGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35020___na    151 CACCAAACTGAGAATCTCTCATTTCAAAACATCACTACAGTTAATTTGGA    200

BSNT_05330___    201 TGAGTACGCCGGACTTTCAAGCAACGCCCCGAACAGCTATCACTTCTATA    250
                     ||||||||||||||||||||||.|.|.|||||||||||||||||||||||
BSU35020___na    201 TGAGTACGCCGGACTTTCAAGCGATGACCCGAACAGCTATCACTTCTATA    250

BSNT_05330___    251 TGAATGACCGTTTATTTCAGCATATCGACAGCAAGCCTAGCCGGCATTTT    300
                     ||||.||||||||.||||||||||||||||||||||||||||||||||||
BSU35020___na    251 TGAACGACCGTTTTTTTCAGCATATCGACAGCAAGCCTAGCCGGCATTTT    300

BSNT_05330___    301 ATTCCGAATGGAAATGCAGACGATTTGGAAGCCGAATGCAGACGGTATGA    350
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU35020___na    301 ATTCCGAATGGAAATGCAGACGATTTGGAGGCCGAATGCAGACGGTATGA    350

BSNT_05330___    351 ACAGCTAGTCGAGTCCCTCGGCGGCACTGACATTCAGCTTCTCGGCATCG    400
                     ||||||||||||.||||||||||.||||||||||||||||||||||||||
BSU35020___na    351 ACAGCTAGTCGATTCCCTCGGCGACACTGACATTCAGCTTCTCGGCATCG    400

BSNT_05330___    401 GCCGAAACGGGCACATCGGCTTTAACGAACCGGGAACGTCTTTCAAGTCG    450
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU35020___na    401 GCCGAAACGGACACATCGGCTTTAACGAACCGGGAACGTCTTTCAAGTCG    450

BSNT_05330___    451 CGAACTCATGTTGTGACATTAAATGAGCAAACCCGCCAAGCGAATGCCAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35020___na    451 CGAACTCATGTTGTGACATTAAATGAGCAAACCCGCCAAGCGAATGCCAG    500

BSNT_05330___    501 ATATTTTCCTTCCATAGACAGCGTGCCGAAAAAAGCGCTCACAATGGGAA    550
                     |||||||||.||||||||||||||||||||||||||.||.||||||||||
BSU35020___na    501 ATATTTTCCCTCCATAGACAGCGTGCCGAAAAAAGCACTGACAATGGGAA    550

BSNT_05330___    551 TTCAAACGATACTCTCAAGCAAGCGCATTCTGCTGCTCATTTCTGGAAAA    600
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU35020___na    551 TTCAAACGATACTCTCAAGCAAGCGCATTCTGCTGCTTATTTCTGGAAAA    600

BSNT_05330___    601 AGCAAAGCGGAAGCTGTTCGTAAGCTGTTAGAAGGAAACATAAGCGAAGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35020___na    601 AGCAAAGCGGAAGCTGTTCGTAAGCTGTTAGAAGGAAACATAAGCGAAGA    650

BSNT_05330___    651 TTTTCCCGCATCTGCTTTGCACCTGCATTCCGATGTTACGGTTTTGATTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35020___na    651 TTTTCCCGCATCTGCTTTGCACCTGCATTCCGATGTTACGGTTTTGATTG    700

BSNT_05330___    701 ATCGTGAAGCCGCGTCATTAAGACCTTGA    729
                     |||||||||||||||||||||||||||||
BSU35020___na    701 ATCGTGAAGCCGCGTCATTAAGACCTTGA    729


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