Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05346 and BSU35150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:07
# Commandline: needle
# -asequence dna-align/BSNT_05346.1.22522.seq
# -bsequence dna-align/BSU35150___yvzB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05346-BSU35150___yvzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05346-BSU35150___yvzB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05346
# 2: BSU35150___yvzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 834
# Identity: 412/834 (49.4%)
# Similarity: 412/834 (49.4%)
# Gaps: 363/834 (43.5%)
# Score: 1728.0
#
#
#=======================================
BSNT_05346 1 ATGAGAATCAACCACAATATTGCAGCGCTTAACACATTAAACCGTTTGTC 50
BSU35150___yv 0 -------------------------------------------------- 0
BSNT_05346 51 TTCAAACAACAGCGCGAGCTCAAAAAACATGGAGAAACTTTCTTCAGGTC 100
BSU35150___yv 0 -------------------------------------------------- 0
BSNT_05346 101 TTCGCATCAACCGTGCGGGAGATGACGCAGCGGGTCTTGCGATTTCTGAA 150
BSU35150___yv 0 -------------------------------------------------- 0
BSNT_05346 151 AAAATGAGAGGACAAATCAGAGGTCTTGAAATGGCTTCTAAAAACTCTCA 200
BSU35150___yv 0 -------------------------------------------------- 0
BSNT_05346 201 AGACGGAATTTCTCTTATCCAAACAGCTGAGGGTGCATTGACTGAAACCC 250
BSU35150___yv 0 -------------------------------------------------- 0
BSNT_05346 251 ATGCAATCCTTCAACGTATGCGTGAACTTACTGTTCAAGCAGGAAACACA 300
BSU35150___yv 0 -------------------------------------------------- 0
BSNT_05346 301 GGTACACAGCAAACTGAAGATTTAACTGCAATTAAAGATGAAATGGATGC 350
||||||||
BSU35150___yv 1 ------------------------------------------ATGGATGC 8
BSNT_05346 351 TTTAACTGAAGAGATCGATGGAATTTCTCAACGTACTGAATTTAACGGAA 400
..|.|.|||.||..|.|||||.|||||..|.|||||||||||.|||||.|
BSU35150___yv 9 GCTTATTGAGGAAGTTGATGGCATTTCAAATCGTACTGAATTCAACGGCA 58
BSNT_05346 401 AAAAACTTTTAGACGGTAGTGAAACAGCAGGATTTACATTCCAAATTGGT 450
||||..|.|||||.||||.||||||.|..||.||.||.|||||||||||.
BSU35150___yv 59 AAAAGTTATTAGATGGTACTGAAACTGATGGTTTCACTTTCCAAATTGGA 108
BSNT_05346 451 GCAAATGCTGGCCAAAATATTAATGTTACAATTGGCAACATG-GATGCAA 499
||||||||||||||..|..|||..||||..||||.||.|||| .|| |||
BSU35150___yv 109 GCAAATGCTGGCCAGCAGCTTACAGTTAACATTGACAGCATGTCAT-CAA 157
BSNT_05346 500 CAACTTTAGGAGTAAAAGGTATCGATGTTTCAGCAGATGATTT------- 542
|..|||||||||||||.|...|..|||| |.||||| |||
BSU35150___yv 158 CTGCTTTAGGAGTAAACGCACTTAATGT---AACAGAT--TTTGCTAATA 202
BSNT_05346 543 -TAGTTTTGACACTGAGATTGTTAAA--ATCGATAGTGCAAT-TACAAGT 588
|..||||||.||..|..||| ||| ||.||||.|||||| .|||| |
BSU35150___yv 203 CTCCTTTTGATACACAACTTG--AAAGTATTGATACTGCAATCAACAA-T 249
BSNT_05346 589 GTTTCAAACCAACGTGCTAAACTTGGTGCGGTACAAAACCGTCTAGAGCA 638
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU35150___yv 250 GTCTCAAACCAACGTGCTAAACTTGGTGCGGTACAAAACCGTCTAGAGCA 299
BSNT_05346 639 CACAATCAACAACCTTGGTGCTTCTTCTGAAAACCTGACAGCTGCTGAGT 688
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35150___yv 300 CACAATCAACAACCTTGGTGCTTCTTCTGAAAACCTGACAGCTGCTGAGT 349
BSNT_05346 689 CTCGTATCCGTGACGTTGACATGGCGAAAGAAATGAGCGAGTTCACAAAG 738
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU35150___yv 350 CCCGTATCCGTGACGTTGACATGGCGAAAGAAATGAGCGAGTTCACAAAG 399
BSNT_05346 739 AACAACATTCTTTCTCAAGCTTCTCAAGCGATGCTTGCTCAAGCAAACCA 788
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU35150___yv 400 AACAACATTCCTTCTCAAGCTTCTCAAGCGATGCTTGCTCAAGCAAACCA 449
BSNT_05346 789 ACAGCCGCAAAACGTGCTTCAATTGTTACGTTAA 822
||||||||||||||||||||||||||||||||||
BSU35150___yv 450 ACAGCCGCAAAACGTGCTTCAATTGTTACGTTAA 483
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