Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05366 and BSU35270

See Amino acid alignment / Visit BSNT_05366 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:10
# Commandline: needle
#    -asequence dna-align/BSNT_05366___cccB.1.22522.seq
#    -bsequence dna-align/BSU35270___cccB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05366___cccB-BSU35270___cccB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05366___cccB-BSU35270___cccB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05366___cccB
# 2: BSU35270___cccB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity:     338/339 (99.7%)
# Similarity:   338/339 (99.7%)
# Gaps:           0/339 ( 0.0%)
# Score: 1686.0
# 
#
#=======================================

BSNT_05366___      1 ATGAAATCAAAGTTATCGATACTAATGATTGGATTTGCGCTTTCTGTTCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35270___cc      1 ATGAAATCAAAGTTATCGATACTAATGATTGGATTTGCGCTTTCTGTTCT     50

BSNT_05366___     51 GTTGGCTGCCTGCGGATCAAACGATGCAAAAGAAGAGAAGACAGACACTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35270___cc     51 GTTGGCTGCCTGCGGATCAAACGATGCAAAAGAAGAGAAGACAGACACTG    100

BSNT_05366___    101 GCAGCAAGACGGAAGCCACTGCATCTGAAGGGGAAGAATTATATCAGCAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35270___cc    101 GCAGCAAGACGGAAGCCACTGCATCTGAAGGGGAAGAATTATATCAGCAA    150

BSNT_05366___    151 AGCTGCGTAGGCTGCCACGGCAAGGATTTAGAAGGTGTGTCAGGGCCTAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35270___cc    151 AGCTGCGTAGGCTGCCACGGCAAGGATTTAGAAGGTGTGTCAGGGCCTAA    200

BSNT_05366___    201 TCTCCAAGAGGTCGGAGGCAAATACGATGAACACAAAATTGAAAGCATTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35270___cc    201 TCTCCAAGAGGTCGGAGGCAAATACGATGAACACAAAATTGAAAGCATTA    250

BSNT_05366___    251 TTAAAAACGGCCGCGGCAATATGCCAAAGGGGCTTGTAGAGGATAACGAA    300
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU35270___cc    251 TTAAAAACGGCCGCGGCAATATGCCAAAGGGGCTTGTAGATGATAACGAA    300

BSNT_05366___    301 GCCGCTGTTATTGCCAAATGGCTGTCAGAAAAAAAGTAA    339
                     |||||||||||||||||||||||||||||||||||||||
BSU35270___cc    301 GCCGCTGTTATTGCCAAATGGCTGTCAGAAAAAAAGTAA    339


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