Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05369 and BSU35290

See Amino acid alignment / Visit BSNT_05369 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:10
# Commandline: needle
#    -asequence dna-align/BSNT_05369.1.22522.seq
#    -bsequence dna-align/BSU35290___prfB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05369-BSU35290___prfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05369-BSU35290___prfB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05369
# 2: BSU35290___prfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1102
# Identity:     973/1102 (88.3%)
# Similarity:   973/1102 (88.3%)
# Gaps:         118/1102 (10.7%)
# Score: 4821.0
# 
#
#=======================================

BSNT_05369         0 --------------------------------------------------      0
                                                                       
BSU35290___pr      1 ATGGAATTATCAGAAATTAGAGCAGAGCTCGAAAATATGGCTTCTCGTTT     50

BSNT_05369         0 --------------------------------------------------      0
                                                                       
BSU35290___pr     51 AGCGGACTTTAGGGGGTCTCTTTGACCTCGAATCAAAGGAGGCCCGCATT    100

BSNT_05369         1 ------------------ATGGCTGATCCGGAATTCTGGAATGATCAGCA     32
                                       ||||||||||||||||||||||||||||||||
BSU35290___pr    101 GCTGAGCTAGATGAACAAATGGCTGATCCGGAATTCTGGAATGATCAGCA    150

BSNT_05369        33 AAAAGCTCAAACGGTTATAAATGAAGCAAACGGTTTAAAGGATTATGTCA     82
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr    151 AAAAGCTCAAACGGTTATAAATGAAGCAAACGGTTTAAAGGATTATGTCA    200

BSNT_05369        83 ATTCGTATAAAAAATTGAATGAATCCCACGAAGAATTACAAATGACTCAT    132
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr    201 ATTCGTATAAAAAATTGAATGAATCCCACGAAGAATTACAAATGACTCAT    250

BSNT_05369       133 GATCTTTTGAAAGAAGAGCCGGACACTGATCTCCAGCTTGAGCTTGAAAA    182
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr    251 GATCTTTTGAAAGAAGAGCCGGACACTGATCTCCAGCTTGAGCTTGAAAA    300

BSNT_05369       183 AGAACTAAAATCATTAACAAAAGACTTCAATGAGTTTGAGCTTCAGCTTC    232
                     |||||||||.||||||||||||||.|||||||||||||||||||||||||
BSU35290___pr    301 AGAACTAAAGTCATTAACAAAAGAGTTCAATGAGTTTGAGCTTCAGCTTC    350

BSNT_05369       233 TTCTCAGCGAGCCGTATGATAAAAATAACGCGATTTTAGAACTGCACCCT    282
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr    351 TTCTCAGCGAGCCGTATGATAAAAATAACGCGATTTTAGAACTGCACCCT    400

BSNT_05369       283 GGTGCTGGCGGTACAGAGTCACAGGACTGGGGCTCTATGCTTCTTAGAAT    332
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr    401 GGTGCTGGCGGTACAGAGTCACAGGACTGGGGCTCTATGCTTCTTAGAAT    450

BSNT_05369       333 GTATACAAGATGGGGAGAGCGCCGCGGCTTTAAAGTAGAAACACTCGATT    382
                     |||||||||||||||||||||||||||||||||||||||.||.|||||||
BSU35290___pr    451 GTATACAAGATGGGGAGAGCGCCGCGGCTTTAAAGTAGAGACTCTCGATT    500

BSNT_05369       383 ACCTTCCAGGTGACGAGGCTGGAATCAAGTCAGTGACATTGCTCATCAAA    432
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU35290___pr    501 ACCTTCCAGGTGACGAGGCGGGAATCAAGTCAGTGACATTGCTCATCAAA    550

BSNT_05369       433 GGACATAACGCTTACGGGTATCTCAAAGCAGAAAAAGGTGTCCATCGTCT    482
                     |||||.|||||||||||||||||||||||||||||||||||.||||||||
BSU35290___pr    551 GGACACAACGCTTACGGGTATCTCAAAGCAGAAAAAGGTGTTCATCGTCT    600

BSNT_05369       483 TGTGCGGATCTCACCATTTGATTCATCAGGCCGCCGCCACACATCTTTCG    532
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr    601 TGTGCGGATCTCACCATTTGATTCATCAGGCCGCCGCCACACATCTTTCG    650

BSNT_05369       533 TTTCATGTGAAGTCATGCCTGAATTTAACGATGAAATTGATATTGATATT    582
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr    651 TTTCATGTGAAGTCATGCCTGAATTTAACGATGAAATTGATATTGATATT    700

BSNT_05369       583 CGTGCGGAGGATATTAAAGTTGACACGTACCGTGCAAGCGGCGCGGGCGG    632
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr    701 CGTACGGAGGATATTAAAGTTGACACGTACCGTGCAAGCGGCGCGGGCGG    750

BSNT_05369       633 ACAGCACGTCAATACGACGGATTCAGCCGTTCGGATTACTCACTTGCCGA    682
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr    751 ACAGCACGTCAATACGACGGATTCAGCCGTTCGGATTACTCACTTGCCGA    800

BSNT_05369       683 CGAACGTAGTTGTGACATGCCAAACGGAGCGCTCACAAATTAAAAACCGT    732
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr    801 CGAACGTAGTTGTGACATGCCAAACGGAGCGCTCACAAATTAAAAACCGT    850

BSNT_05369       733 GAAAGAGCCATGAAAATGCTGAAGGCCAAGCTGTATCAGCGCAGAATTGA    782
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr    851 GAAAGAGCCATGAAAATGCTGAAGGCCAAGCTGTATCAGCGCAGAATTGA    900

BSNT_05369       783 AGAGCAGCAGGCTGAACTGGATGAAATTCGTGGTGAACAAAAAGAAATCG    832
                     ||||||||||||.||.||||||||||||||.|||||||||||||||||||
BSU35290___pr    901 AGAGCAGCAGGCAGAGCTGGATGAAATTCGCGGTGAACAAAAAGAAATCG    950

BSNT_05369       833 GCTGGGGCAGCCAAATCCGTTCTTATGTATTCCATCCGTATTCCATGGTA    882
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr    951 GCTGGGGCAGCCAAATCCGTTCTTATGTATTCCATCCGTATTCCATGGTA   1000

BSNT_05369       883 AAAGACCATCGGACCAATACAGAAATGGGGAACGTTCAAGCTGTAATGGA    932
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr   1001 AAAGACCATCGGACCAATACAGAAATGGGGAACGTTCAAGCTGTAATGGA   1050

BSNT_05369       933 TGGTGACATTGATACGTTTATTGATGCCTACCTGCGTTCTAAGCTTTCAT    982
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35290___pr   1051 TGGTGACATTGATACGTTTATTGATGCCTACCTGCGTTCTAAGCTTTCAT   1100

BSNT_05369       983 AA    984
                     ||
BSU35290___pr   1101 AA   1102


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