Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05378 and BSU35350
See
Amino acid alignment /
Visit
BSNT_05378 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence dna-align/BSNT_05378.1.22522.seq
# -bsequence dna-align/BSU35350___yvyC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05378-BSU35350___yvyC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05378-BSU35350___yvyC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05378
# 2: BSU35350___yvyC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 330
# Identity: 192/330 (58.2%)
# Similarity: 192/330 (58.2%)
# Gaps: 138/330 (41.8%)
# Score: 960.0
#
#
#=======================================
BSNT_05378 0 -------------------------------------------------- 0
BSU35350___yv 1 TTGAACATTGAAAGGCTCACTACGTTACAACCTGTTTGGGATCGTTATGA 50
BSNT_05378 0 -------------------------------------------------- 0
BSU35350___yv 51 TACTCAAATACATAATCAGAAAGATAATGATAACGAGGTTCCTGTTCATC 100
BSNT_05378 1 --------------------------------------ATGAACAAGCTT 12
||||||||||||
BSU35350___yv 101 AAGTTTCATATACCAATCTTGCTGAAATGGTGGGGGAAATGAACAAGCTT 150
BSNT_05378 13 TTGGAACCTTCGCAAGTTCATCTGAAGTTCGAGCTTCATGACAAGTTAAA 62
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35350___yv 151 TTGGAACCTTCGCAAGTTCATCTGAAGTTCGAGCTTCATGACAAGTTAAA 200
BSNT_05378 63 TGAATACTATGTAAAGGTAATAGAGGACTCTACAAATGAAGTGATCCGCG 112
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35350___yv 201 TGAATACTATGTAAAGGTAATAGAGGACTCTACAAATGAAGTGATCCGCG 250
BSNT_05378 113 AAATTCCACCAAAACGGTGGCTTGATTTTTATGCGGCTATGACTGAATTT 162
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35350___yv 251 AAATTCCACCAAAACGGTGGCTTGATTTTTATGCGGCTATGACTGAATTT 300
BSNT_05378 163 CTTGGGTTATTTGTAGATGAAAAAAAGTAG 192
||||||||||||||||||||||||||||||
BSU35350___yv 301 CTTGGGTTATTTGTAGATGAAAAAAAGTAG 330
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.