Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05393 and BSU35480

See Amino acid alignment / Visit BSNT_05393 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:14
# Commandline: needle
#    -asequence dna-align/BSNT_05393___yviA.1.22522.seq
#    -bsequence dna-align/BSU35480___yviA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05393___yviA-BSU35480___yviA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05393___yviA-BSU35480___yviA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05393___yviA
# 2: BSU35480___yviA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 846
# Identity:     843/846 (99.6%)
# Similarity:   843/846 (99.6%)
# Gaps:           0/846 ( 0.0%)
# Score: 4203.0
# 
#
#=======================================

BSNT_05393___      1 ATGAATATTGCAGTCGTAACAGACAGCACGGCATATATTCCGAAAGAAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv      1 ATGAATATTGCAGTCGTAACAGACAGCACGGCATATATTCCGAAAGAAAT     50

BSNT_05393___     51 ACGTGAACAACATCAGATACATATGATCCCTCTCCAGGTTGTTTTTAGGG    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv     51 GCGTGAACAACATCAGATACATATGATCCCTCTCCAGGTTGTTTTTAGGG    100

BSNT_05393___    101 AGGAGACTTACCGTGAAGAAATTGAGTTGGACTGGAAAAGCTTTTACGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU35480___yv    101 AGGAGACTTACCGTGAAGAAATTGAGTTGGACTGGAAAAGCTTTTATGAA    150

BSNT_05393___    151 GAAGTGAAAAAACATAATGAGCTCCCGACGACTTCTCAGCCGCCAATCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv    151 GAAGTGAAAAAACATAATGAGCTCCCGACGACTTCTCAGCCGCCAATCGG    200

BSNT_05393___    201 CGAGCTGGTTGCGTTGTATGAAGAGCTTGGCAAGTCTTATGATGCGGTTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv    201 CGAGCTGGTTGCGTTGTATGAAGAGCTTGGCAAGTCTTATGATGCGGTTA    250

BSNT_05393___    251 TCAGTATCCATCTTTCCAGCGGGATCAGCGGAACATTCAGCAGTGCAGCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv    251 TCAGTATCCATCTTTCCAGCGGGATCAGCGGAACATTCAGCAGTGCAGCA    300

BSNT_05393___    301 GCGGCTGATTCGATGGTCGACAATATTGATGTGTATCCATTTGACTCAGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv    301 GCGGCTGATTCGATGGTCGACAATATTGATGTGTATCCATTTGACTCAGA    350

BSNT_05393___    351 GATCAGCTGCTTGGCTCAAGGCTTTTATGCCCTTAAAGCTGCTGAATTAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv    351 GATCAGCTGCTTGGCTCAAGGCTTTTATGCCCTTAAAGCTGCTGAATTAA    400

BSNT_05393___    401 TCAAAAACGGAGCATCATCGCCGGAAGATATTATAAAAGAACTGGAAGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv    401 TCAAAAACGGAGCATCATCGCCGGAAGATATTATAAAAGAACTGGAAGAA    450

BSNT_05393___    451 ATGAAAAAAACAGTTCGAGCTTATTTTATGGTAGATGACTTAGCTCATCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU35480___yv    451 ATGAAAAAAACAGTTCGAGCTTATTTTATGGTAGATGACTTAGCCCATCT    500

BSNT_05393___    501 TCAGCGCGGCGGGCGATTAAGCAGCGCCCAAGCCTTCATTGGTAGTCTTC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv    501 TCAGCGCGGCGGGCGATTAAGCAGCGCCCAAGCCTTCATTGGTAGTCTTC    550

BSNT_05393___    551 TAAAGGTAAAGCCTATCCTTCATTTTGACAATAAGGTAATTGTGCCTTTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv    551 TAAAGGTAAAGCCTATCCTTCATTTTGACAATAAGGTAATTGTGCCTTTT    600

BSNT_05393___    601 GAGAAGATTCGCACACGTAAAAAAGCAATTTCGCGAATTTATGAGCTTTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv    601 GAGAAGATTCGCACACGTAAAAAAGCAATTTCGCGAATTTATGAGCTTTT    650

BSNT_05393___    651 AGACGAAGATGCGAGTAAAGGGTTGCCTATGCGAGCTGCTGTTATCCACG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv    651 AGACGAAGATGCGAGTAAAGGGTTGCCTATGCGAGCTGCTGTTATCCACG    700

BSNT_05393___    701 CTAATCGAGAGGAAGAAGCAGCGAAAATCATTGAAGAGCTTTCTGCAAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv    701 CTAATCGAGAGGAAGAAGCAGCGAAAATCATTGAAGAGCTTTCTGCAAAA    750

BSNT_05393___    751 TATCCTCATGTTGAATTTTATAACAGCTATTTTGGCGCGGTAATCGGCAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv    751 TATCCTCATGTTGAATTTTATAACAGCTATTTTGGCGCGGTAATCGGCAC    800

BSNT_05393___    801 TCATTTGGGTGAAGGTGCGTTAGGAATTTGCTGGTGTTTTAAATAA    846
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU35480___yv    801 TCATTTGGGTGAAGGTGCGTTAGGAATTTGCTGGTGTTTTAAATAA    846


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