Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05396 and BSU35510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:15
# Commandline: needle
# -asequence dna-align/BSNT_05396___yvyE.1.22522.seq
# -bsequence dna-align/BSU35510___yvyE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05396___yvyE-BSU35510___yvyE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05396___yvyE-BSU35510___yvyE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05396___yvyE
# 2: BSU35510___yvyE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 666
# Identity: 601/666 (90.2%)
# Similarity: 601/666 (90.2%)
# Gaps: 24/666 ( 3.6%)
# Score: 2781.5
#
#
#=======================================
BSNT_05396___ 1 ATGCTGCACAGCTATTTTACTGTGAAAGAAGCAGGAGAACACGAGATTGT 50
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU35510___yv 1 ATGCTGCACAGCTATTTTACTGTGAAAGAAGCGGGAGAACACGAGATTGT 50
BSNT_05396___ 51 TATAGAAAAATCGCGTTTTATCTGTCATTTAAGCCGTGTTTCTACCGAAC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35510___yv 51 TATAGAAAAATCGCGTTTTATCTGTCATTTAAGCCGTGTTTCTACCGAAC 100
BSNT_05396___ 101 AAGAGGCACAGGAATTTATACAGAAAATAAAGAAACAGCACTGGAATGCG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35510___yv 101 AAGAGGCACAGGAATTTATACAGAAAATAAAGAAACAGCACTGGAATGCG 150
BSNT_05396___ 151 ACTCATAATTGCTCGGCTTATGTTATTGGCGAGAATGATCATATCCAAAA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35510___yv 151 ACTCATAATTGCTCGGCTTATGTTATTGGCGAGAATGATCATATCCAAAA 200
BSNT_05396___ 201 AGCCAATGATGACGGGGAACCAAGCGGTACAGCGGGAGTGCCGATGCTCG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35510___yv 201 AGCCAATGATGACGGGGAACCAAGCGGTACAGCGGGAGTGCCGATGCTCG 250
BSNT_05396___ 251 AGGTTTTAAAGAAACGCAGACTGAAGGATACTTGCGCCGTCGTTACACGC 300
||||||||||.||||||||.||||||||||||||||||||||||||||||
BSU35510___yv 251 AGGTTTTAAAAAAACGCAGGCTGAAGGATACTTGCGCCGTCGTTACACGC 300
BSNT_05396___ 301 TACTTCGGAGGCATTAAGCTTGGTGCTGGCGGATTAATTCGCGCTTATGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35510___yv 301 TACTTCGGAGGCATTAAGCTTGGTGCTGGCGGATTAATTCGCGCTTATGG 350
BSNT_05396___ 351 GAAATCAGTGTCTGAAGGATTAAATCATATAGGTGTTGTAGAACGGAAGC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35510___yv 351 GAAATCAGTGTCTGAAGGATTAAATCATATAGGTGTTGTAGAACGGAAGC 400
BSNT_05396___ 401 TTATGCGAATCATGCATACTTCTGCAGATTACACATGGCTTGGCAAGATT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35510___yv 401 TTATGCGAATCATGCATACTTCTGCAGATTACACATGGCTTGGCAAGATT 450
BSNT_05396___ 451 GAAAATGAATTAAGGGAGTCACAATTTCTGTTAAAGGAAATCCATTATGC 500
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU35510___yv 451 GAAAATGAATTAAGGGAGTCACAATTTCTGTTAAAGGAAATCCATTATTC 500
BSNT_05396___ 501 GGAAAACGTTGAATTTGAAGTATACGTAAATGAGAAAAGAA--------- 541
.|||||.||||||||.|||..||||||..|.|| |||||||
BSU35510___yv 501 AGAAAATGTTGAATTCGAAACATACGTGGAAGA-AAAAGAAACCAACGCT 549
BSNT_05396___ 542 TTTCAGAATACTCTCAATGGATTTTAAATTTAACGAATGGATCATGTTAT 591
||| |||.|||||||...|.|..|.||.||||||....||.||
BSU35510___yv 550 TTT--------TCTGAATGGATGACAGAACTGACAAATGGAAAGAGTGAT 591
BSNT_05396___ 592 ACTAAAAAGGGTATTTTGATATATCTTGAAAAACAAGTTGAAAATCA--- 638
|.||||.||||....||||..|||||||||| |||..|..|||||
BSU35510___yv 592 ATTAAAGAGGGAGAGTTGACGTATCTTGAAA---AAGCCGTCAATCACAT 638
BSNT_05396___ 639 AAAGGAGAATAAATGA 654
||||||||.|.|||.|
BSU35510___yv 639 AAAGGAGACTGAATAA 654
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