Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05413 and BSU35560
See
Amino acid alignment /
Visit
BSNT_05413 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence dna-align/BSNT_05413___tuaF.1.22522.seq
# -bsequence dna-align/BSU35560___tuaF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05413___tuaF-BSU35560___tuaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05413___tuaF-BSU35560___tuaF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05413___tuaF
# 2: BSU35560___tuaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 765
# Identity: 423/765 (55.3%)
# Similarity: 423/765 (55.3%)
# Gaps: 174/765 (22.7%)
# Score: 976.5
#
#
#=======================================
BSNT_05413___ 1 ATGA---ATTTAATCAAACGTATTGCTGGTAGAGTGAAAAAGTTTAT--T 45
|||| ||.||.|.|.|.|.||.||..||.|..|.|||||...||| |
BSU35560___tu 1 ATGAACGATATATTGATAAGAATAGCCCGTCGCATAAAAAAAAATATCAT 50
BSNT_05413___ 46 GTGGCGATAATTGTGCTTCCTCTTATTCTTGGTCTTGTGGGCTATTTTAT 95
.|| |||.||.|.|.|.||..||||..|.|||...|.|||.|| |||
BSU35560___tu 51 TTG--GATCATAGCGGTGCCAATTATATTAGGTGCGGCGGGGTA---TAT 95
BSNT_05413___ 96 ACCGAAGGGGAGTGTTGCTCCGT---------CTGATTACACG-GCTA-- 133
.|.| |||| |||||.|.|.| ||||
BSU35560___tu 96 CCTG---------------CCGTCACAGATCGCTGATCAAAAGAGCTATA 130
BSNT_05413___ 134 ---CTGTAACGATATCAACC---GGAAACTATGGAGAAGCTAAG------ 171
||| |.|||| | || ||.||| |.|||||.|
BSU35560___tu 131 CAGCTG--AAGATA-----CTTTGG---CTGTGG-GGAGCTATGATCATC 169
BSNT_05413___ 172 -----TACAACAATGCAAAACAAGTACCGCTGCTGTTGAAAAACGGAGCT 216
||.||||...||.||.|..|.|||||.||.||.||.|.||...|.
BSU35560___tu 170 CGGTTTATAACAGCACAGAAGAGATTCCGCTTCTATTAAAGAGCGACTCC 219
BSNT_05413___ 217 TTTTTAAAGGATATTTTCCCGGG--------GATG--TCGGAAGAGGATT 256
|||||.||||| || |||| ..|||.||.|||.
BSU35560___tu 220 TTTTTGAAGGA----------GGCGCTTCCTGATGAAAAGGATGAAGATG 259
BSNT_05413___ 257 TGGCGCAGTTGAAAGACGATCTGGTGATTGAAATCAGAACGG------AT 300
|.||..||.|.||||| |..|.||..|||||..|||| |.
BSU35560___tu 260 TAGCAGAGATCAAAGA------GAAGCTTACAATCAATACGGAATCCAAA 303
BSNT_05413___ 301 TCGCTTTTTAATTTAAGCTACACAGGGCCTGACAAACAGAAAACATCGGA 350
|||.|..|.|.|||||||||.| .||||.| |||
BSU35560___tu 304 TCGTTACTGACTTTAAGCTATA------GTGACGA------------GGA 335
BSNT_05413___ 351 TACTTTAGGAAA------AATC------AAAGACGCCTATA--------- 379
|| ||||.| |||| || ||||| |||
BSU35560___tu 336 TA----AGGATAGAACGGAATCTGTCTTAA--ACGCC-ATATCCTCCACC 378
BSNT_05413___ 380 ----TGAAAGGCGATAAGGCGCTTTTTTCAAAAAGGGAAGAAGTCATTGA 425
|.|||..||||.|...|||.|.|.||.||||.||||..|||||...
BSU35560___tu 379 TTCCTCAAAAACGATCAAAAGCTGTATGCAGAAAGAGAAGCCGTCATCCG 428
BSNT_05413___ 426 AAATAATATTAAGGCGCTTGAAGGCGAAACAGTCAGCTCTGATTCAAAAG 475
.|..|..||..|.||||||||||||||..|.||.|||...|||||.||||
BSU35560___tu 429 CAGCAGCATAGACGCGCTTGAAGGCGAGTCGGTGAGCGAGGATTCCAAAG 478
BSNT_05413___ 476 TTGACAAACAGCGGTTTTTGTATGAACT-TGAAACAAGCA-AGCTTGATA 523
|.||.|||.||.|.|||||.|||||||| ..||||| || |||||.|..
BSU35560___tu 479 TGGATAAAGAGAGATTTTTATATGAACTCAAAAACA--CACAGCTTAACC 526
BSNT_05413___ 524 TGAAGGCTGCTGAA--GAAATTGAGCCCTTGAA--CGTACTAGATA-ACC 568
||||.||.|| || |..|.|||..|| ||| ||||...||.| |.|
BSU35560___tu 527 TGAAAGCGGC--AAGTGTTACTGATTCC--GAAACCGTAAGTGAGACAGC 572
BSNT_05413___ 569 AGGTTGTCGGCATGTCGCCTAAAAAAAGAGCGGTATTGGGCGTATTGATT 618
||| .|.|||.|||||.||.|||||.|.|||.||..|.|||||..|||||
BSU35560___tu 573 AGG-CGGCGGTATGTCTCCGAAAAAGAAAGCAGTTCTCGGCGTTATGATT 621
BSNT_05413___ 619 GGTTTGGCGCTGTCATT--TTTTATTATTGTTG---TTCCGGAAGTTTTC 663
||..|..|| ||| .|||||..|.|||| ||||.|||.|||||
BSU35560___tu 622 GGCCTTACG-----ATTGCCTTTATGTTCGTTGTCATTCCTGAATTTTTC 666
BSNT_05413___ 664 AGAGAA--CGTTAA- 675
|||||| |.||.|
BSU35560___tu 667 AGAGAATCCTTTTAA 681
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.