Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05452 and BSU35720
See
Amino acid alignment /
Visit
BSNT_05452 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:20
# Commandline: needle
# -asequence dna-align/BSNT_05452___tagF.1.22522.seq
# -bsequence dna-align/BSU35720___tagF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05452___tagF-BSU35720___tagF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05452___tagF-BSU35720___tagF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05452___tagF
# 2: BSU35720___tagF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2494
# Identity: 1444/2494 (57.9%)
# Similarity: 1444/2494 (57.9%)
# Gaps: 611/2494 (24.5%)
# Score: 4018.0
#
#
#=======================================
BSNT_05452___ 1 -------------------------------------ATGGATAGTGCAA 13
|.|||.||.||..
BSU35720___ta 1 ATGTCCTTAGTAGTTGACACTAATAAAAGGAAGCAAAAAGGAAAGAGCTT 50
BSNT_05452___ 14 TTCCGATAAAATTTCAGCTGCTGGA--AATAAAAATTAATGAT------- 54
|| ||| ||| .||| |..|||||.|||||||
BSU35720___ta 51 TT---ATA------CAG----AGGAGCAGAAAAAAGTAATGATTGAAAAC 87
BSNT_05452___ 55 ACTG---------GCCTCTATTTTG-------TG---------TTCGAAA 79
|||| | ||||||| || ||.|.||
BSU35720___ta 88 ACTGTGATTAAATG----TATTTTGAAAAGCTTGAAAAACAATTTAGGAA 133
BSNT_05452___ 80 GTTCTG---------TCTCTCTTGAT------CATGTCGATGTTTTGG-- 112
||..|| ||||..||||| || |.|..||||.|
BSU35720___ta 134 GTCTTGAATTGTTAATCTCAATTGATTCAGAACA---CCAATTTTTAGAG 180
BSNT_05452___ 113 ------CAGTTAACCGCAATACGAAA----AAAGACATGCGTGTACCATG 152
||||| |.|...||| |||||.|..|||..| |
BSU35720___ta 181 GATTACCAGTT------ATTTTTAAAGCTGAAAGAGAGACGTTCA----G 220
BSNT_05452___ 153 TAACAAAATAAG------CGATTCAAAGCAGT--------------TAAA 182
.|||..|||..| ||.||||||.||.| ||||
BSU35720___ta 221 GAACGGAATCTGAATTTCCGCTTCAAAACACTGGCTCATTAGAGTATAAA 270
BSNT_05452___ 183 AGCAGCGA-AAGT----ATCTTTAGATGACCTATCTAACCTGATGATA-- 225
| |.|.|| ||.| ||.|||.| ||||| .||||.|||.|
BSU35720___ta 271 A-CTGAGATAAATGCTCATGTTTTG----CCTAT---GCCTGTTGAAATG 312
BSNT_05452___ 226 -GACGAAGCGGTCAT-TGATTTTTATGTACTATATAAAAATAATAAAAAA 273
|||.|| ||| ||||||||||||...||.|..| ||||||
BSU35720___ta 313 GGACAAA-----CATATGATTTTTATGTCGAATTTCGA------AAAAAA 351
BSNT_05452___ 274 TATCAATGTAAAAAG-AGGATTTACAC----AGCATC------------- 305
|||.||..|....|| ||||...||.| |||.||
BSU35720___ta 352 TATGAAGATGCGGAGCAGGAACCACTCTTGAAGCGTCTTTCTGCTGAAGT 401
BSNT_05452___ 306 AAAACCGATTGAG-----CTGTCTTGGCATAAGGATCAAGCCAATCAGTT 350
|||..|.|||||| ||.||.||.| ||||||.||| |||..
BSU35720___ta 402 AAATTCAATTGAGCGCGCCTTTCATGTC-----GATCAAACCA--CAGAA 444
BSNT_05452___ 351 CATTT--ATTTACCGTATAAGACCCTAAAAGGCCACTTCGCTCTTGATGT 398
|.||| .||||||.||||..||....||||||.||||..||.||.|.||
BSU35720___ta 445 CTTTTGATTTTACCTTATACAACTGATAAAGGCAACTTTTCTATTAAGGT 494
BSNT_05452___ 399 TTTACGAAGTAAAGCAGTGG------------------------------ 418
|.|||| ||.||
BSU35720___ta 495 --------GAAAAG-AGAGGCCAAAATCATCAGATTTGATCAAATCGAGA 535
BSNT_05452___ 419 ------CTGAACCGGA---CAGCATGAA---GTTATGC------------ 444
||||| || .||||| || |||||||
BSU35720___ta 536 TTAGCTCTGAA---GAAATAAGCAT-AACAGGTTATGCGGGGTACCTGAG 581
BSNT_05452___ 445 -TCCGACGGAAAATTAATGATCGGAGGCTATACTT-----TTCTGCTA-- 486
||| ||||||.||| ||||||....|.|||| ||.|..||
BSU35720___ta 582 TTCC----GAAAATCAAT-ATCGGATAAAAAACTTGAACCTTATTTTAAA 626
BSNT_05452___ 487 ----GATGCTGAAGAACGTTCATT-AGTAAAAA---GCAGA--AAGCTGG 526
|.||..|||..||.| ||| ||.||||| .|| | |||||.|
BSU35720___ta 627 AAAGGGTGGAGAAACACCT--ATTGAGGAAAAATTTCCA-ATCAAGCTAG 673
BSNT_05452___ 527 TTTTAAAGGAAA----TTAGCC---AAAACGATAAGGAGA------GGTT 563
||||.||| .|.||| ||||| |.|||| ||||
BSU35720___ta 674 ----AAAGAAAAACACATGGCCTGGAAAAC----ATGAGAGCAGATGGTT 715
BSNT_05452___ 564 TTTTGATTTCCCTTTAAAAGACGTTCAGCGCGGCGATCTATCAGCTG-AT 612
|| |||| ||| |.||| ||
BSU35720___ta 716 TT--------------------GTTC----CGG---------AACTGTAT 732
BSNT_05452___ 613 TCTTCAGATCATACCGTAGGGTTTGAGGTGGAAATTG-ATCTGAAAAAGC 661
||| |||||.|| ||||.|| .|.|||||.|..
BSU35720___ta 733 ------GAT------------TTTGAAGT-GAAAGTGCCTTTGAAAGAAA 763
BSNT_05452___ 662 T---------ATATGAAGAAAACAGGATGCCTGCTT-----TCTTTCAGT 697
| |.|||| |||||...||| || ||| |
BSU35720___ta 764 TTCCTTTCTCAAATGA--AAAACGTTATG-----TTTATCGTCT-----T 801
BSNT_05452___ 698 TTTATATAGAATACGTAGG---TGAAGATGCTGCAACAGGGGAGGA-AAT 743
|||||..||.||| ||.| |||.||||..|.||| ||| |.|
BSU35720___ta 802 TTTATGGAGTATA--TATGCAATGACGATGAAGGAAC------GGATATT 843
BSNT_05452___ 744 CATTATAAAAAGCAGGAC-----ATTCAGGCTGATTG------------- 775
||.| |.||.||||...| .||.||| .|||.|
BSU35720___ta 844 CAGT-TCAACAGCACTGCTCTTGTTTTAGG-AGATCGAAAAAACAAATTA 891
BSNT_05452___ 776 --ATGATATAGACAGTTTTTCAATTGTTGACACAAAAAAAGGACCGGCTC 823
|.||| |||..||| |||.||.|.|||||.||.|.|||.|.||
BSU35720___ta 892 AAAGGAT-TAGTAAGT------ATTATTAAAACAAACAACGCACCAGTTC 934
BSNT_05452___ 824 GTTTTCACA---TTTATCCGCAG-AAGCGAAAACGGAGCATGTGTCTAAG 869
|||.|.| | |||| || ||..||||| |||| |..||||.|
BSU35720___ta 935 GTTATGA-AGTCTTTA-----AGAAAAAGAAAA---AGCA-GACTCTAGG 974
BSNT_05452___ 870 AATGAATGATTACACGATCAGAACCCG---------------TGCGGTTT 904
.||.| ||.||.||||..|.|.||.| |.| |||
BSU35720___ta 975 TATCA--GAGTAAACGACTATAGCCTGAAAACAAGGATGAAATAC--TTT 1020
BSNT_05452___ 905 ATTTTGCCAAAGGAAAAGGTAAAAGGCTGATGTCAGTCATCCGTAAAGGC 954
||| |||||||| |.|.||| || ||..||| .|
BSU35720___ta 1021 ATT-----AAAGGAAA--GAAGAAG---------AG--ATTAGTA---TC 1049
BSNT_05452___ 955 AAGAATAAAGTAAAGA----AAAAGATTTCGGGCATGGTGAAGAGG---- 996
||.|||||| ||||| |||| |||...||.|.|
BSU35720___ta 1050 AAAAATAAA--AAAGATCACAAAA----------ATGAGAAACAAGTTAA 1087
BSNT_05452___ 997 --------GCATACTATTTTACTTT---TGAACTGGCCGGCAAACTGCCT 1035
.|||||.|.|.| ||.| ||| ||||..|||.|.||||.
BSU35720___ta 1088 TCACTAAAACATACAAATCT-CTATTCATGA--TGGCTAGCAGAATGCCA 1134
BSNT_05452___ 1036 GTTAAAAAGAAAACCGTCATTTTTGAAAGCTTTGCCGGTAAGCAGTACAG 1085
|||||||.||||||.||||||||||||||.|||...||.||.||.|||||
BSU35720___ta 1135 GTTAAAAGGAAAACAGTCATTTTTGAAAGTTTTAATGGGAAACAATACAG 1184
BSNT_05452___ 1086 CTGCAATCCAAGAGCAATTTATGAATATATGAAGGAACATCACCCGGAAT 1135
.||.|||||.|||||.|||||.|||||||||..||||.|.|||||.||.|
BSU35720___ta 1185 TTGTAATCCGAGAGCGATTTACGAATATATGCGGGAAAACCACCCTGAGT 1234
BSNT_05452___ 1136 ACAACTTAAT---ATGGAGTGTAAAT--CCGAGTTATACAGAAATTTTCG 1180
|.|| ||| .|||||||||||| .|.| |||.|||....|||.|
BSU35720___ta 1235 ATAA---AATGTATTGGAGTGTAAATAAACAA--TATTCAGCGCCTTTTG 1279
BSNT_05452___ 1181 AAGAAAA---AAATGTCCCTTATATTAACCGATTCACGCTGAAGTGGCTG 1227
|.||||| || |.|||||.|||||.||..||.|..|.||.|||||.
BSU35720___ta 1280 ATGAAAAGGGAA---TTCCTTACATTAATCGCCTCTCATTAAAATGGCTC 1326
BSNT_05452___ 1228 TTCGCCATGGCAAGGGCGGAATTTTGGGTTGTAAACAGCCGGCTCCCTTT 1277
|||||.||||||||.||.||.|.|||||||||.|||||||||||.||.||
BSU35720___ta 1327 TTCGCTATGGCAAGAGCTGAGTATTGGGTTGTTAACAGCCGGCTTCCATT 1376
BSNT_05452___ 1278 ATGGATACCCAAACCAAAGCACACGACATATGTGCAGACGTGGCACGGGA 1327
||||||.||.|||||.|..||.||.||||||.|.||.||.|||||.||.|
BSU35720___ta 1377 ATGGATTCCGAAACCTAGTCATACAACATATTTACAAACATGGCATGGCA 1426
BSNT_05452___ 1328 CTCCGCTGAAAAGGCTTGCCGTCGATATGGAAGAAGTGCACATGCCGGGC 1377
|.||..|.|||||.|||||..|.||||||||||||||.||.|||||.||.
BSU35720___ta 1427 CACCTTTAAAAAGACTTGCAATGGATATGGAAGAAGTCCATATGCCTGGT 1476
BSNT_05452___ 1378 ACCAACACTGAGAAGTACAAGCAA--AATTTCACTAAAGAAGCATCTAAG 1425
||.|||||..|.||.||.|| || |||||.|..||.|||||.|||||.
BSU35720___ta 1477 ACAAACACCAAAAAATATAA--AAGGAATTTTATCAAGGAAGCTTCTAAT 1524
BSNT_05452___ 1426 TGGGACTATTTAATATCCCCGAATCGGTATTCAACCGAGATTTTTGCCCG 1475
|||||.||.||.||.|||||.|||.|.||||||||.|||||.|||.|.||
BSU35720___ta 1525 TGGGATTACTTGATTTCCCCAAATGGTTATTCAACTGAGATCTTTACACG 1574
BSNT_05452___ 1476 CGCTTTTCAATTTAACAAAACAATGATTGAGTCCGGATACCCGAGGAATG 1525
.||.|||||.||||||||.|||||||||||.||.|||||.||.||.||||
BSU35720___ta 1575 GGCGTTTCAGTTTAACAAGACAATGATTGAATCTGGATATCCTAGAAATG 1624
BSNT_05452___ 1526 ATTTTCTGTATACAGACAACCGCCCGGAAACGA------TGAAGGCCATA 1569
|||||||..|||..||.||......||||||.| || |||
BSU35720___ta 1625 ATTTTCTTCATAATGATAATAATGAGGAAACAATATCATTG------ATA 1668
BSNT_05452___ 1570 AAGAAAAAAATGAATA-TCCCCGAAGATAAAAAGGTCATTTTATATGCAC 1618
||||..|...|.|||| |||.|| .|||||||||||.|||||||||||.|
BSU35720___ta 1669 AAGAGTAGGTTAAATATTCCTCG-TGATAAAAAGGTTATTTTATATGCCC 1717
BSNT_05452___ 1619 CGACATGGCGGGACGATCAGTTCTATAAAAAAGGAAAATACAAATTTGAC 1668
|.||||||.|.||.||||||||||||..||||||....||.||.||.||.
BSU35720___ta 1718 CTACATGGAGAGATGATCAGTTCTATGCAAAAGGGCGTTATAAGTTCGAT 1767
BSNT_05452___ 1669 CTTGATTTGAATATGGAAAAGCTGCGAGAGGAGATCGGCGATAATTACGT 1718
||.|||||..||.||.|..|.||..||.|.||..|.||..||.|.||..|
BSU35720___ta 1768 CTCGATTTAGATTTGCATCAACTTAGACAAGAACTTGGAAATGAATATAT 1817
BSNT_05452___ 1719 CATCATTTTAAGAATGCACTATTTAGTCGCGGAAAACTTTGA-------C 1761
..|.||.|||||||||||.|||.|.||.||.||.||.||||| |
BSU35720___ta 1818 TGTAATCTTAAGAATGCATTATCTGGTAGCTGAGAATTTTGATTTAGGTC 1867
BSNT_05452___ 1762 CTTTCACCCTACAAAGGATTCGCATATGATTTCTCAGCATATGAAGATAT 1811
|||| ..|||||||.|||||||||||.||.||.|||||.|||||
BSU35720___ta 1868 CTTT-------TGAAGGATTTGCATATGATTTTTCTGCTTATGAGGATAT 1910
BSNT_05452___ 1812 TCGCGAACTTTATATGGTATCTGATTTGTTAATTACAGATTACTCTTCAG 1861
|||.|||.|.||||||||.|||||||||.|.|||||.|||||.|||||||
BSU35720___ta 1911 TCGAGAATTGTATATGGTTTCTGATTTGCTGATTACTGATTATTCTTCAG 1960
BSNT_05452___ 1862 TATTCTTTGATTTCGCAAATTTGAAACGTCCAATGATTTTCTTCGTTCCA 1911
|||||||||||||.||||||||.|||||.||||||.|.|||||.||.||.
BSU35720___ta 1961 TATTCTTTGATTTTGCAAATTTAAAACGGCCAATGCTATTCTTTGTCCCT 2010
BSNT_05452___ 1912 GACATTGAAACCTATCGTGACAAGCTGCGCGGCTTTTATTTTGACTTTGA 1961
|||||.||||||||.||.||||||.||||.||.||.||.|||||.|||||
BSU35720___ta 2011 GACATCGAAACCTACCGGGACAAGTTGCGTGGTTTCTACTTTGATTTTGA 2060
BSNT_05452___ 1962 ACGAGAAGCACCAGGTCCGTTAGTCAAAACGACTGAGGGAGTAATTGAGA 2011
|..||||||.||.|||||.||.||.|||||.|||||.|.|...||||||.
BSU35720___ta 2061 AAAAGAAGCTCCTGGTCCTTTGGTAAAAACTACTGAAGAAACGATTGAGG 2110
BSNT_05452___ 2012 AAATCAAGGAAACAGAGACATCTGACTATCGCCTG-----------CCAG 2050
..|||||| ||| |||| .|||||||| ||.|
BSU35720___ta 2111 CTATCAAG----CAG----ATCT---CATCGCCTGATTATAAGCTTCCGG 2149
BSNT_05452___ 2051 ACATTTTTGAACCTTTTTATGAAAGGTTTTGTTACCTGGAGACAGGTAAC 2100
....|||||..|||||.|||||.|.||||||.||..|.|||.|||| ||
BSU35720___ta 2150 TTTCTTTTGGTCCTTTCTATGATAAGTTTTGCTATTTAGAGTCAGG--AC 2197
BSNT_05452___ 2101 --TCTTCGGAAAAAGTAGTGAATA--GAATTT----TTGAGTAA 2136
||.||.|||||.||.||.|||| |.|||| .|||.|||
BSU35720___ta 2198 GTTCATCTGAAAAGGTTGTTAATACTGTATTTAAAGCTGAATAA 2241
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.