Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05472 and BSU35900

See Amino acid alignment / Visit BSNT_05472 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:23
# Commandline: needle
#    -asequence dna-align/BSNT_05472___ywsC.1.22522.seq
#    -bsequence dna-align/BSU35900___pgsB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05472___ywsC-BSU35900___pgsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05472___ywsC-BSU35900___pgsB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05472___ywsC
# 2: BSU35900___pgsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1182
# Identity:    1178/1182 (99.7%)
# Similarity:  1178/1182 (99.7%)
# Gaps:           0/1182 ( 0.0%)
# Score: 5874.0
# 
#
#=======================================

BSNT_05472___      1 ATGTGGTTACTCATTATAGCCTGTGCTGTCATACTGGTCATCGGAATATT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg      1 ATGTGGTTACTCATTATAGCCTGTGCTGTCATACTGGTCATCGGAATATT     50

BSNT_05472___     51 AGAAAAACGACGACATCAGAAAAACATTGATGCCCTCCCTGTTCGGGTGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg     51 AGAAAAACGACGACATCAGAAAAACATTGATGCCCTCCCTGTTCGGGTGA    100

BSNT_05472___    101 ATATTAACGGCATCCGCGGAAAATCGACTGTGACAAGGCTGACAACCGGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    101 ATATTAACGGCATCCGCGGAAAATCGACTGTGACAAGGCTGACAACCGGA    150

BSNT_05472___    151 ATATTAATAGAAGCCGGTTACAAGACTGTTGGAAAAACAACAGGAACAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    151 ATATTAATAGAAGCCGGTTACAAGACTGTTGGAAAAACAACAGGAACAGA    200

BSNT_05472___    201 TGCAAGAATGATTTACTGGGACACACCGGAGGAAAAGCCGATTAAACGGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    201 TGCAAGAATGATTTACTGGGACACACCGGAGGAAAAGCCGATTAAACGGA    250

BSNT_05472___    251 AACCTCAGGGGCCGAATATCGGAGAGCAAAAAGAAGTCATGAGAGAAACA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    251 AACCTCAGGGGCCGAATATCGGAGAGCAAAAAGAAGTCATGAGAGAAACA    300

BSNT_05472___    301 GTAGAAAGAGGGGCTAACGCGATTGTCAGTGAATGCATGGCTGTTAACCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    301 GTAGAAAGAGGGGCTAACGCGATTGTCAGTGAATGCATGGCTGTTAACCC    350

BSNT_05472___    351 AGATTATCAAATCATCTTTCAGGAAGAACTTCTGCAGGCCAATATCGGCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    351 AGATTATCAAATCATCTTTCAGGAAGAACTTCTGCAGGCCAATATCGGCG    400

BSNT_05472___    401 TCATTGTGAATGTTTTAGAAGACCATATGGATGTCATGGGGCCGACGCTT    450
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU35900___pg    401 TCATTGTGAATGTTTTGGAAGACCATATGGATGTCATGGGGCCGACGCTT    450

BSNT_05472___    451 GATGAAATTGCAGAAGCGTTTACCGCTACAATTCCTTATAATGGCCATCT    500
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU35900___pg    451 GATGAAATTGCAGAAGCGTTTACTGCTACAATTCCTTATAATGGCCATCT    500

BSNT_05472___    501 TGTCATTACAGATAGTGAATATACCGAGTTCTTTAAACAAAAAGCAAAAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    501 TGTCATTACAGATAGTGAATATACCGAGTTCTTTAAACAAAAAGCAAAAG    550

BSNT_05472___    551 AACGAAACACAAAAGTCATCATTGCTGATAACTCAAAAATTACAGATGAG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    551 AACGAAACACAAAAGTCATCATTGCTGATAACTCAAAAATTACAGATGAG    600

BSNT_05472___    601 TATTTACGTAAATTTGAATACATGGTATTCCCTGATAACGCTTCTCTGGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    601 TATTTACGTAAATTTGAATACATGGTATTCCCTGATAACGCTTCTCTGGC    650

BSNT_05472___    651 GCTGGGTGTGGCTCAAGCACTCGGCATTGACGAAGAAACAGCATTTAAGG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    651 GCTGGGTGTGGCTCAAGCACTCGGCATTGACGAAGAAACAGCATTTAAGG    700

BSNT_05472___    701 GAATGCTGAATGCGCCGCCAGATCCGGGAGCAATGAGAATTCTTCCGCTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    701 GAATGCTGAATGCGCCGCCAGATCCGGGAGCAATGAGAATTCTTCCGCTG    750

BSNT_05472___    751 ATCAGTCCGAGCGAGCCTGGGCACTTTGTTAATGGGTTTGCCGCAAACGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    751 ATCAGTCCGAGCGAGCCTGGGCACTTTGTTAATGGGTTTGCCGCAAACGA    800

BSNT_05472___    801 CGCTTCTTCTACTTTGAATATATGGAAACGTGTAAAAGAAATCGGTTACC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    801 CGCTTCTTCTACTTTGAATATATGGAAACGTGTAAAAGAAATCGGTTACC    850

BSNT_05472___    851 CGACCGATGATCCGATCATCATCATGAACTGCCGCGCAGACCGTGTCGAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    851 CGACCGATGATCCGATCATCATCATGAACTGCCGCGCAGACCGTGTCGAT    900

BSNT_05472___    901 CGGACACAGCAATTCGCAAATGACGTATTGCCTTATATTGAAGCAAGTGA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg    901 CGGACACAGCAATTCGCAAATGACGTATTGCCTTATATTGAAGCAAGTGA    950

BSNT_05472___    951 ACTGATCTTAATCGGTGAAACAACAGAACCGATCGTAAAAGCCTATGAAG   1000
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU35900___pg    951 ACTGATCTTAATCGGTGAAACAACAGAACCGATCGTAAAAGCCTACGAAG   1000

BSNT_05472___   1001 AAGGCAAAATTCCTGCAGACAAACTGCATGATCTAGAGTATAAGTCAACA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg   1001 AAGGCAAAATTCCTGCAGACAAACTGCATGATCTAGAGTATAAGTCAACA   1050

BSNT_05472___   1051 GATGAAATTATGGAATTGTTAAAGAAAAGAATGCACAACCGTGTCATATA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg   1051 GATGAAATTATGGAATTGTTAAAGAAAAGAATGCACAACCGTGTCATATA   1100

BSNT_05472___   1101 TGGCGTCGGCAATATTCATGGTGCCGCAGAGCCTTTAATTGAAAAAATCC   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35900___pg   1101 TGGCGTCGGCAATATTCATGGTGCCGCAGAGCCTTTAATTGAAAAAATCC   1150

BSNT_05472___   1151 ACGAATACAAGGTTAAGCAGCTCGTAAGCTAG   1182
                     |||||||||||||.||||||||||||||||||
BSU35900___pg   1151 ACGAATACAAGGTAAAGCAGCTCGTAAGCTAG   1182


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