Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_05484 and BSU35990

See Amino acid alignment / Visit BSNT_05484 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence dna-align/BSNT_05484___ywrO.1.22522.seq
#    -bsequence dna-align/BSU35990___ywrO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05484___ywrO-BSU35990___ywrO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05484___ywrO-BSU35990___ywrO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05484___ywrO
# 2: BSU35990___ywrO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 528
# Identity:     521/528 (98.7%)
# Similarity:   521/528 (98.7%)
# Gaps:           0/528 ( 0.0%)
# Score: 2577.0
# 
#
#=======================================

BSNT_05484___      1 ATGAAAATATTGGTTTTGGCAGTTCATCCTCATATGGAGACCTCAGTTGT     50
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU35990___yw      1 ATGAAAATATTGGTTTTGGCAGTGCATCCTCATATGGAGACCTCAGTTGT     50

BSNT_05484___     51 CAATAAGGCGTGGGCTGAGGAATTGAGTAAACATGACAATATCACAGTAC    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU35990___yw     51 TAATAAGGCGTGGGCTGAGGAATTGAGTAAACATGACAATATCACAGTAC    100

BSNT_05484___    101 GGGATCTTTATAAGGAATACCCGGATGAAGCGATAGATGTTGCGAAGGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35990___yw    101 GGGATCTTTATAAGGAATACCCGGATGAAGCGATAGATGTTGCGAAGGAA    150

BSNT_05484___    151 CAGCAGTTGTGCGAGGAATACGATCGGATTGTCTTTCAATTCCCGCTATA    200
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU35990___yw    151 CAGCAGCTGTGCGAGGAATACGATCGGATTGTCTTTCAATTCCCGCTATA    200

BSNT_05484___    201 TTGGTACAGCTCTCCGCCGCTCTTGAAAAAATGGCAGGATCTTGTGCTGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35990___yw    201 TTGGTACAGCTCTCCGCCGCTCTTGAAAAAATGGCAGGATCTTGTGCTGA    250

BSNT_05484___    251 CTTATGGCTGGGCTTTTGGTTCAGAAGGAAATGCCTTGCATGGCAAGGAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35990___yw    251 CTTATGGCTGGGCTTTTGGTTCAGAAGGAAATGCCTTGCATGGCAAGGAG    300

BSNT_05484___    301 CCGATGCTGGCTGTATCAACAGGGAGCGAAGCGGAAAAATATCAAGCGGG    350
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU35990___yw    301 CTGATGCTGGCTGTATCAACAGGGAGCGAAGCGGAAAAATATCAAGCGGG    350

BSNT_05484___    351 CGGAGCAAATCATTACTCGATCAGTGAGCTATTGAAACCATTTCAGGCCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35990___yw    351 CGGAGCAAATCATTACTCGATCAGTGAGCTATTGAAACCATTTCAGGCCA    400

BSNT_05484___    401 CGAGTAATCTGATCGGTATGAAGTATCTGCCTCCATATGTGTTCTATGGC    450
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU35990___yw    401 CGAGTAATCTGATCGGCATGAAGTATCTGCCTCCATATGTGTTCTATGGC    450

BSNT_05484___    451 GTGAATTATGCAGCTGCAGAGGATATTTCACACAGTGCAAAACGGTTAGC    500
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU35990___yw    451 GTGAATTATGCAGCTGCAGAGGATATTTCTCACAGTGCAAAACGGTTAGC    500

BSNT_05484___    501 CGAATACATTCAGCAGCCTTTTGTTTAA    528
                     |||||||||.||||||||||||||||||
BSU35990___yw    501 CGAATACATCCAGCAGCCTTTTGTTTAA    528


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.