Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05489 and BSU36020

See Amino acid alignment / Visit BSNT_05489 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:26
# Commandline: needle
#    -asequence dna-align/BSNT_05489___alsR.1.22522.seq
#    -bsequence dna-align/BSU36020___alsR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05489___alsR-BSU36020___alsR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05489___alsR-BSU36020___alsR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05489___alsR
# 2: BSU36020___alsR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 909
# Identity:     903/909 (99.3%)
# Similarity:   903/909 (99.3%)
# Gaps:           0/909 ( 0.0%)
# Score: 4491.0
# 
#
#=======================================

BSNT_05489___      1 ATGGAGCTTCGCCATCTTCAATACTTTATCGCAGTAGCCGAAGAGCTTCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al      1 ATGGAGCTTCGCCATCTTCAATACTTTATCGCAGTAGCCGAAGAGCTTCA     50

BSNT_05489___     51 TTTCGGAAAGGCTGCCCGGCGGCTGAACATGACGCAGCCTCCTCTCAGCC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al     51 TTTCGGAAAGGCTGCCCGGCGGCTGAACATGACGCAGCCTCCTCTCAGCC    100

BSNT_05489___    101 AGCAGATCAAACAGCTGGAGGAAGAAGTCGGAGTTACGCTTCTGAAAAGG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    101 AGCAGATCAAACAGCTGGAGGAAGAAGTCGGAGTTACGCTTCTGAAAAGG    150

BSNT_05489___    151 ACAAAACGATTTGTCGAGCTTACCGCAGCAGGAGAAATCTTTTTAAATCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    151 ACAAAACGATTTGTCGAGCTTACCGCAGCAGGAGAAATCTTTTTAAATCA    200

BSNT_05489___    201 TTGCCGCATGGCCTTGATGCAAATCGGACAAGGAATTGAACTGGCACAGC    250
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU36020___al    201 TTGCCGCATGGCATTGATGCAAATCGGACAAGGAATTGAACTGGCACAGC    250

BSNT_05489___    251 GGACGGCCCGCGGCGAGCAAGGCCTTCTCGTAATCGGTTTTGTCGGATCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    251 GGACGGCCCGCGGCGAGCAAGGCCTTCTCGTAATCGGTTTTGTCGGATCA    300

BSNT_05489___    301 GCTACATATGAATTTCTGCCGCCGATTGTCCGGGAATATCGTAAAAAATT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    301 GCTACATATGAATTTCTGCCGCCGATTGTCCGGGAATATCGTAAAAAATT    350

BSNT_05489___    351 CCCATGTGTGAAAATAGAACTGCGTGAAATATCCTCGTCTAGGCAGCAAG    400
                     |||||.||||||||||||||||||||||||||||||||||||||||||.|
BSU36020___al    351 CCCATCTGTGAAAATAGAACTGCGTGAAATATCCTCGTCTAGGCAGCAGG    400

BSNT_05489___    401 AGGAGCTACTAAAGGGCAACATTGATATTGGTATACTTCATCCTCCCTTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    401 AGGAGCTACTAAAGGGCAACATTGATATTGGTATACTTCATCCTCCCTTA    450

BSNT_05489___    451 CAGCATACAGCTTTACATATCGAAACCGCCCAAAGCAGCCCTTGTGTTTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    451 CAGCATACAGCTTTACATATCGAAACCGCCCAAAGCAGCCCTTGTGTTTT    500

BSNT_05489___    501 AGCTTTGCCTAAGCAACACCCATTGACTTCTAAGGAATCAATTACGATTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    501 AGCTTTGCCTAAGCAACACCCATTGACTTCTAAGGAATCAATTACGATTG    550

BSNT_05489___    551 AGGATTTAAGAGATGAACCAATTATTACTGTTGCTAAAGAAGCATGGCCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    551 AGGATTTAAGAGATGAACCAATTATTACTGTTGCTAAAGAAGCATGGCCT    600

BSNT_05489___    601 ACTCTATACATGGATTTTATTCAGTTCTGTGAACAAGCGGGCTTCAGACC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    601 ACTCTATACATGGATTTTATTCAGTTCTGTGAACAAGCGGGCTTCAGACC    650

BSNT_05489___    651 CAACATTGTCCAGGAAGCCACAGAATATCAAATGGTGATTGGTTTAGTCA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    651 CAACATTGTCCAGGAAGCCACAGAATATCAAATGGTGATTGGTTTAGTCA    700

BSNT_05489___    701 GCGCCGGAATTGGTATGACATTTGTTCCTTCCTCAGCCAAAAAATTATTT    750
                     |.||||||||||||||||||||||||||||||||.|||||||||||||||
BSU36020___al    701 GTGCCGGAATTGGTATGACATTTGTTCCTTCCTCGGCCAAAAAATTATTT    750

BSNT_05489___    751 AATTTGGATGTTACTTATCGAAAAATGGACCAAATACAGCTTAATGCCGA    800
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU36020___al    751 AATTTGGATGTTACTTATCGAAAAATGGACCAAATACAGCTTAATGCAGA    800

BSNT_05489___    801 ATGGGTTATCGCTTACCGCAAAGACAATCATAATCCGCTTATAAAGCATT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    801 ATGGGTTATCGCTTACCGCAAAGACAATCATAATCCGCTTATAAAGCATT    850

BSNT_05489___    851 TTATTCATATTTCAAATTGTCAGCAGACAAGAACTAAAGAGAGTGATGCA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    851 TTATTCATATTTCAAATTGTCAGCAGACAAGAACTAAAGAGAGTGATGCA    900

BSNT_05489___    901 GGTACATGA    909
                     |||||||||
BSU36020___al    901 GGTACATGA    909


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