Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05502 and BSU36080

See Amino acid alignment / Visit BSNT_05502 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:26
# Commandline: needle
#    -asequence dna-align/BSNT_05502___ywrF.1.22522.seq
#    -bsequence dna-align/BSU36080___ywrF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05502___ywrF-BSU36080___ywrF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05502___ywrF-BSU36080___ywrF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05502___ywrF
# 2: BSU36080___ywrF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 618
# Identity:     613/618 (99.2%)
# Similarity:   613/618 (99.2%)
# Gaps:           0/618 ( 0.0%)
# Score: 3045.0
# 
#
#=======================================

BSNT_05502___      1 ATGTACATATTTCAAGCTGATCAGCTTAGTGCCAAAGACACATACAAGCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36080___yw      1 ATGTACATATTTCAAGCTGATCAGCTTAGTGCCAAAGACACATACAAGCT     50

BSNT_05502___     51 ATTGTCAGGTACCGTTATTCCCCGCCCCATTGCATTTGTGACAACACTTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36080___yw     51 ATTGTCAGGTACCGTTATTCCCCGCCCCATTGCATTTGTGACAACACTTT    100

BSNT_05502___    101 CTTCAGAAGGAGCGGTCAATGCCGCGCCTTTCAGTTTTTATAACGTCGTC    150
                     ||||||.|||||||||.|||||||||||||||||||||||||||||||||
BSU36080___yw    101 CTTCAGGAGGAGCGGTAAATGCCGCGCCTTTCAGTTTTTATAACGTCGTC    150

BSNT_05502___    151 AGCTCAGATCCTCCGCTTCTCAGTATTTCTGTTAACAGGACGGAAGGACG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36080___yw    151 AGCTCAGATCCTCCGCTTCTCAGTATTTCTGTTAACAGGACGGAAGGACG    200

BSNT_05502___    201 CCAAAAAGATACAGCGCGAAACGCAGTGGAGAACGGAGAATTTGTCGTTC    250
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU36080___yw    201 CCAAAAAGATACAGCACGAAACGCAGTGGAGAACGGAGAATTTGTCGTTC    250

BSNT_05502___    251 ATGTCAGTGATGAAGCCATCATTGAAGATATCAATGAAACAGCTGCAAGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36080___yw    251 ATGTCAGTGATGAAGCCATCATTGAAGATATCAATGAAACAGCTGCAAGC    300

BSNT_05502___    301 TTAAGGCCGGATGAAAGCGAGCTTACACGCACCTCGCTTCATCCTGTTGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36080___yw    301 TTAAGGCCGGATGAAAGCGAGCTTACACGCACCTCGCTTCATCCTGTTGA    350

BSNT_05502___    351 AAGCAAAGCTGTTTCAGTTCCCGGCATTAAGGAAGCCCGCGTTCGCTTTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36080___yw    351 AAGCAAAGCTGTTTCAGTTCCCGGCATTAAGGAAGCCCGCGTTCGCTTTG    400

BSNT_05502___    401 AGTGCAAATTAGAGCGGCATATTACCTTTGACAATGATCAAGGCATCACT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36080___yw    401 AGTGCAAATTAGAGCGGCATATTACCTTTGACAATGATCAAGGCATCACT    450

BSNT_05502___    451 ACAGCAGATCTGCTCATCGGAAGGGTTGTCTGCTTCCACCTAGATGAAAA    500
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU36080___yw    451 ACAGCAGATCTGCTCATCGGAAGAGTTGTCTGCTTCCACCTAGATGAAAA    500

BSNT_05502___    501 GGTGTATGATGCAGAAAAGGGATATATTTTAACGGATGAATTAAAACCTG    550
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU36080___yw    501 GGTGTATGATGCAGAAAAGGGATATATTTTAACGGATGAATTAAAGCCTG    550

BSNT_05502___    551 CCTCACGATTGGCGGGAAATCACTATGCCAAGCTGGGGGAAGAATTCACA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36080___yw    551 CCTCACGATTGGCGGGAAATCACTATGCCAAGCTGGGGGAAGAATTCACA    600

BSNT_05502___    601 CTGATTCGTCCCAGCTGA    618
                     ||||||||||||||||||
BSU36080___yw    601 CTGATTCGTCCCAGCTGA    618


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