Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05505 and BSU36090

See Amino acid alignment / Visit BSNT_05505 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:27
# Commandline: needle
#    -asequence dna-align/BSNT_05505___ywrE.1.22522.seq
#    -bsequence dna-align/BSU36090___ywrE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05505___ywrE-BSU36090___ywrE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05505___ywrE-BSU36090___ywrE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05505___ywrE
# 2: BSU36090___ywrE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 336
# Identity:     333/336 (99.1%)
# Similarity:   333/336 (99.1%)
# Gaps:           0/336 ( 0.0%)
# Score: 1653.0
# 
#
#=======================================

BSNT_05505___      1 ATGACAAACTTTTGGATTTTAATGCTGATCGCTATTACCATCAGTCTCGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36090___yw      1 ATGACAAACTTTTGGATTTTAATGCTGATCGCTATTACCATCAGTCTCGC     50

BSNT_05505___     51 CTCTCAATTTTTTATAAAGAAAAAATACGGTATTGATAAATCCGGCTGGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36090___yw     51 CTCTCAATTTTTTATAAAGAAAAAATACGGTATTGATAAATCCGGCTGGC    100

BSNT_05505___    101 GATATAAGCATGTCAGCAATACACACAAATGGATCGAAATCACTTTACTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36090___yw    101 GATATAAGCATGTCAGCAATACACACAAATGGATCGAAATCACTTTACTT    150

BSNT_05505___    151 ATTTTGTTTGTATTTTCACTCTCCTTTTTTCCAGTTGAATATTTGCTTCT    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU36090___yw    151 ATTTTGTTTGTGTTTTCACTCTCCTTTTTTCCAGTTGAATATTTGCTTCT    200

BSNT_05505___    201 TTTATTTTTTATTGTGATTGACTCAATACGAATTTTTATGGAGTGGCATT    250
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU36090___yw    201 TTTATTTTTTATTGTGATTGACTCAATACGTATTTTTATGGAGTGGCATT    250

BSNT_05505___    251 ATAGACCTGAAGATAAACAGTATATGTACCACATTGTAGAGGTCTCCCTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36090___yw    251 ATAGACCTGAAGATAAACAGTATATGTACCACATTGTAGAGGTCTCCCTT    300

BSNT_05505___    301 ATGTTTATGCTTTTGATTTATATTTGTACCCTATAG    336
                     |||||||||||||||||||||.||||||||||||||
BSU36090___yw    301 ATGTTTATGCTTTTGATTTATGTTTGTACCCTATAG    336


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