Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05506 and BSU36100

See Amino acid alignment / Visit BSNT_05506 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:27
# Commandline: needle
#    -asequence dna-align/BSNT_05506___ywrD.1.22522.seq
#    -bsequence dna-align/BSU36100___ywrD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05506___ywrD-BSU36100___ywrD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05506___ywrD-BSU36100___ywrD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05506___ywrD
# 2: BSU36100___ywrD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1578
# Identity:    1540/1578 (97.6%)
# Similarity:  1540/1578 (97.6%)
# Gaps:           0/1578 ( 0.0%)
# Score: 7548.0
# 
#
#=======================================

BSNT_05506___      1 ATGAACAGATCTGTCATCGGTACAAAGCAAATGGTCGTCAGTCCGCATTA     50
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw      1 ATGAACAAATCTGTCATCGGTACAAAGCAAATGGTCGTCAGTCCGCATTA     50

BSNT_05506___     51 CCTCGCTTCTCAAGCCGGAAACCGCATACTAGACAAGGGAGGCAACGCGT    100
                     .|||||||||||||||||||||||||||||.||.||||||||||||||||
BSU36100___yw     51 TCTCGCTTCTCAAGCCGGAAACCGCATACTGGATAAGGGAGGCAACGCGT    100

BSNT_05506___    101 TTGACGCTGCTGTTGCGGTGAGTGCTTGTCTTGCGGTTGTGTATCCGCAT    150
                     |||||||.|||||||||||||||||||||||||||||||||||.||||||
BSU36100___yw    101 TTGACGCCGCTGTTGCGGTGAGTGCTTGTCTTGCGGTTGTGTACCCGCAT    150

BSNT_05506___    151 ATGACCGGACTTGGCGGGGATTCCTTTTGGCTAACCTTTCACCAGGAAAC    200
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU36100___yw    151 ATGACCGGACTTGGCGGGGATTCCTTTTGGCTGACCTTTCACCAGGAAAC    200

BSNT_05506___    201 AAAGGCAGTAAAAGTCTACAATGGCAGCGGCCGTTCAGGAAAAAACGTAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw    201 AAAGGCAGTAAAAGTCTACAATGGCAGCGGCCGTTCAGGAAAAAACGTAA    250

BSNT_05506___    251 CGAGAGATGTATATAAGGGAAAAAGCGCGATTCCGCTGCGGGGGATTGAC    300
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU36100___yw    251 CGAGAGATGTATATAAGGGAAAAAGCGCGATTCCGCTGCGGGGAATTGAC    300

BSNT_05506___    301 AGTGCCATTACCGTGCCGGGAATGGTTGATAGCTGGGATGCGGTCCTGAA    350
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw    301 AGTGCTATTACCGTGCCGGGAATGGTTGATAGCTGGGATGCGGTCCTGAA    350

BSNT_05506___    351 GGAGTACGGGCGTCTGTCTCTTGCAGATGTATTGGAGCCCGCACGCGATT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw    351 GGAGTACGGGCGTCTGTCTCTTGCAGATGTATTGGAGCCCGCACGCGATT    400

BSNT_05506___    401 ATGCCCAAAATGGGTTTCCTGTATCAGCTGATCAGTGTCGTCACACAGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw    401 ATGCCCAAAATGGGTTTCCTGTATCAGCTGATCAGTGTCGTCACACAGAA    450

BSNT_05506___    451 AAGAATATTGAATTGCTGGCTTCCACGCCTTACACGGCTGACATCTTCAC    500
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU36100___yw    451 AAGAATATTGAACTGCTGGCTTCCACGCCTTACACGGCTGACATCTTCAC    500

BSNT_05506___    501 GAGAAGGGGCAAAGCACCTGTCCCGGGAGAGCGGTTTTTGCAAAAAGAGC    550
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU36100___yw    501 GAGAAGGGGCAAAGCACCTGTCCCGGGAGAGCGGTTTGTGCAAAAAGAGC    550

BSNT_05506___    551 TTGCAGACAGTCTGAATGTGATTGCTGAAAAAGGAAGAAGCGCATTTTAT    600
                     ||||||||||||||||..||||||||||||||||||||||||||||||||
BSU36100___yw    551 TTGCAGACAGTCTGAACTTGATTGCTGAAAAAGGAAGAAGCGCATTTTAT    600

BSNT_05506___    601 GAAGGAGATCTCGCTCAGCGGATTGTCTCACATTTACAGAATAACGGCAG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw    601 GAAGGAGATCTCGCTCAGCGGATTGTCTCACATTTACAGAATAACGGCAG    650

BSNT_05506___    651 TTACATGACAATCGATGATTTTAAAGCGCATCGGGGTGAGTGGGCAGCGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw    651 TTACATGACAATCGATGATTTTAAAGCGCATCGGGGTGAGTGGGCAGCGC    700

BSNT_05506___    701 CTGTATCAAGTGATTATCGAGGATACAGTGTGTATCAGGCGCCGCCGAAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw    701 CTGTATCAAGTGATTATCGAGGATACAGTGTGTATCAGGCGCCGCCGAAT    750

BSNT_05506___    751 TCTCAGGGATTTACCGGTTTATTAACACTGAACATTTTGGAAAACTATGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw    751 TCTCAGGGATTTACCGGTTTATTAACACTGAACATTTTGGAAAACTATGA    800

BSNT_05506___    801 TTTCACCCAAATCGAGCACGGTTCATTTGAGTATTATCATGTGCTTGTGG    850
                     |||||||||||||||.|||||||||||||||||||||||.||||||||||
BSU36100___yw    801 TTTCACCCAAATCGAACACGGTTCATTTGAGTATTATCACGTGCTTGTGG    850

BSNT_05506___    851 AGGCGTTGAAAAAGAGTTTTGTAGATCGGAATGCCTTTTTGACTGACCCT    900
                     ||||.|||||||||||||||.||||||||.|||||.|..|||||||.||.
BSU36100___yw    851 AGGCATTGAAAAAGAGTTTTCTAGATCGGGATGCCGTCCTGACTGATCCG    900

BSNT_05506___    901 GCGTTTGCTGACATTCCGCTTGAAAGGCTTTTAGATAAAAATTATGCGAA    950
                     ||||||||.|||||||||||||||||||||||.||.|||..||||||.||
BSU36100___yw    901 GCGTTTGCAGACATTCCGCTTGAAAGGCTTTTGGACAAACGTTATGCAAA    950

BSNT_05506___    951 ACGATTGGCGGGAGAAATCGGCTATCTGGCAGAACCGGCAGAAAGCAGGC   1000
                     ||.||||||.|.|||||||||||||||.|||..|||||||||||||||||
BSU36100___yw    951 ACAATTGGCAGAAGAAATCGGCTATCTCGCAATACCGGCAGAAAGCAGGC   1000

BSNT_05506___   1001 CGGTGGGAAGTGATACGGCATATGCGGCCGTAATCGATGCGGATGGCAAC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw   1001 CGGTGGGAAGTGATACGGCATATGCGGCCGTAATCGATGCGGATGGCAAC   1050

BSNT_05506___   1051 GCAGTGTCATTCATTCAAAGCCTGTACTTTGAATTTGGCTCGGCAGTCAC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw   1051 GCAGTGTCATTCATTCAAAGCCTGTACTTTGAATTTGGCTCGGCAGTCAC   1100

BSNT_05506___   1101 TGCCGGTGATACAGGCATATTACTGCAAAACCGCGGATCATTTTTCTCAC   1150
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU36100___yw   1101 TGCCGGTGATACAGGCATATTACTGCAAAACCGCGGATCGTTTTTCTCAC   1150

BSNT_05506___   1151 TGGATGAAAATCATGTCAACACGCTTGAACCGAGAAAGCGCACCTTCCAT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw   1151 TGGATGAAAATCATGTCAACACGCTTGAACCGAGAAAGCGCACCTTCCAT   1200

BSNT_05506___   1201 ACGTTGATGCCGGCTATGGTCTGTAAAGGCGGAAAGCCAAAAATTCTGTA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw   1201 ACGTTGATGCCGGCTATGGTCTGTAAAGGCGGAAAGCCAAAAATTCTGTA   1250

BSNT_05506___   1251 CGGCACACAAGGCGGCGAAGGCCAGCCGCAGACCCAGACGGCCATCATTA   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw   1251 CGGCACACAAGGCGGCGAAGGCCAGCCGCAGACCCAGACGGCCATCATTA   1300

BSNT_05506___   1301 CCCGAATGCTGGACTACGGAATGCATCCACAGCAGGCAATTAGCGAACCG   1350
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU36100___yw   1301 CCCGAATGCTGGACTACGGAATGCATCCACAGCAGGCAATCAGCGAACCG   1350

BSNT_05506___   1351 CGCTGGGTATGGGGCAGAACGTGGGGAGAGGAATACGAAGGTCTCAGAGT   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw   1351 CGCTGGGTATGGGGCAGAACGTGGGGAGAGGAATACGAAGGTCTCAGAGT   1400

BSNT_05506___   1401 CGAGGGCAGATTCACAGACAAAACAATCCAAAAACTGAAAGACAGCGGGC   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw   1401 CGAGGGCAGATTCACAGACAAAACAATCCAAAAACTGAAAGACAGCGGGC   1450

BSNT_05506___   1451 ATCTCGTGGAGGTTGTCGGTGACTATGATCCGCTGATGGGACAAGCGGCT   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw   1451 ATCTCGTGGAGGTTGTCGGTGACTATGATCCGCTGATGGGACAAGCGGCT   1500

BSNT_05506___   1501 GCAATCAAAGTTGATGAAGAAGGCTTTCTCCAAGGCGGAGCCGATCCTCG   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36100___yw   1501 GCAATCAAAGTTGATGAAGAAGGCTTTCTCCAAGGCGGAGCCGATCCTCG   1550

BSNT_05506___   1551 GGGAGACGGAGCGGCTGTGGGGATATAA   1578
                     ||||||||||||||||||||||||.|||
BSU36100___yw   1551 GGGAGACGGAGCGGCTGTGGGGATTTAA   1578


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