Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05521 and BSU36190
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:28
# Commandline: needle
# -asequence dna-align/BSNT_05521.1.22522.seq
# -bsequence dna-align/BSU36190___ywqJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05521-BSU36190___ywqJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05521-BSU36190___ywqJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05521
# 2: BSU36190___ywqJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1847
# Identity: 1374/1847 (74.4%)
# Similarity: 1374/1847 (74.4%)
# Gaps: 403/1847 (21.8%)
# Score: 5928.0
#
#
#=======================================
BSNT_05521 1 ATGAGCAAAGTATTTGAATCTAAATCTTTAATCGAAGAAGCGAAGAGCAG 50
|||||.||||||||||||||.|||||||||||||||||||||||||||||
BSU36190___yw 1 ATGAGTAAAGTATTTGAATCAAAATCTTTAATCGAAGAAGCGAAGAGCAG 50
BSNT_05521 51 AAAAAAGCAATATGAGACGCTTGAGGAGCAGCTGAATACGCTGAAAAAAG 100
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU36190___yw 51 AAAAAAGCAATATGAGACGCTTGAAGAGCAGCTGAATACGCTGAAAAAAG 100
BSNT_05521 101 CGTTTCAGGGAGTTGCAGATTTAGGCGATAATTTTAAAGGAAAAGGCGCG 150
||||||||||||||||.||||||||||||||||||||||||||.||||||
BSU36190___yw 101 CGTTTCAGGGAGTTGCCGATTTAGGCGATAATTTTAAAGGAAATGGCGCG 150
BSNT_05521 151 GACAATATTAAAGATTTTTTTCAGGGACAGGCGGAAATCGTAGACAGCTG 200
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU36190___yw 151 GACAATATTAAAGATTTTTTTCAGGGACAGGCAGAAATCGTAGACAGCTG 200
BSNT_05521 201 GCTGACGCTTGTCTCTGCTCAAATTGCGTTTTTAAATGGCATTTCAGGAG 250
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU36190___yw 201 GCTGACGCTTGTCTCTGCTCAAATTGCGTTTTTAAACGGCATTTCAGGAG 250
BSNT_05521 251 ATATTAAAGATCAAGAACTGAATGATTCATATGTGGAAACTTCTTTTTTG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36190___yw 251 ATATTAAAGATCAAGAACTGAATGATTCATATGTGGAAACTTCTTTTTTG 300
BSNT_05521 301 GATCATGAGCTGCCCAATGGAGACCTGAAAGCCTCAGAGATTGTCTCCGC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36190___yw 301 GATCATGAGCTGCCCAATGGAGACCTGAAAGCCTCAGAGATTGTCTCCGC 350
BSNT_05521 351 CCATAAAGAAGAAATCGATTCTATTTTGTCAGGCATCAGCGATATTATTG 400
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU36190___yw 351 TCATAAAGAAGAAATCGATTCTATTTTGTCAGGCATCAGCGATATTATTG 400
BSNT_05521 401 ACCTCGACATGTATACGCTTGACGACTATGCAGATAAGATGGGCGATGCC 450
|.|||||||||||.||||||||||||||||||||||||||||||||||||
BSU36190___yw 401 ATCTCGACATGTACACGCTTGACGACTATGCAGATAAGATGGGCGATGCC 450
BSNT_05521 451 CAAAAAATCAGACGTGACACGATCACAGCTGTCGATAAGCTTGATGAATC 500
|||||||||||||||||.||.|||||||||||||||||||||||||||||
BSU36190___yw 451 CAAAAAATCAGACGTGATACAATCACAGCTGTCGATAAGCTTGATGAATC 500
BSNT_05521 501 CCTGACAACTGAATATCAAAATTTAGAATCTCTGGACAACGCAGTGCTCA 550
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU36190___yw 501 CCTGACCACTGAATATCAAAATTTAGAATCTCTGGACAACGCAGTGCTCA 550
BSNT_05521 551 CCAAATATTCCGTTCTCATGCAGGCCACCAGCAATGGGAAGAGCGCTTCT 600
||||||||||.|||||||||||||||||||||||||||||||||||.||.
BSU36190___yw 551 CCAAATATTCTGTTCTCATGCAGGCCACCAGCAATGGGAAGAGCGCATCC 600
BSNT_05521 601 CCTATGTACTATGACAAAAAAGCCTTCCACAGCAATGAAGTCTACAAAAG 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36190___yw 601 CCTATGTACTATGACAAAAAAGCCTTCCACAGCAATGAAGTCTACAAAAG 650
BSNT_05521 651 CGTCATTGAAGTAGAAAATCAAGGAACAACCTATATCGATGCAAAAACCC 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36190___yw 651 CGTCATTGAAGTAGAAAATCAAGGAACAACCTATATCGATGCAAAAACCC 700
BSNT_05521 701 AGCAAGCAGAAGCAAGACGGCTCCAGGAAAAAGCCGAGGAAGAAGCAAAC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36190___yw 701 AGCAAGCAGAAGCAAGACGGCTCCAGGAAAAAGCCGAGGAAGAAGCAAAC 750
BSNT_05521 751 AAACCGTGGTACGAAAAAACATGGGATGGAGTTTGCAACTTTACTGGAGA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36190___yw 751 AAACCGTGGTACGAAAAAACATGGGATGGAGTTTGCAACTTTACTGGAGA 800
BSNT_05521 801 AGTCACTGGCTATTATGATTATAAAAGAGCAACCGAAGGCGTTGATCCGG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36190___yw 801 AGTCACTGGCTATTATGATTATAAAAGAGCAACCGAAGGCGTTGATCCGG 850
BSNT_05521 851 TTACCGGAGAAAAACTCTCCACCGCAGAGCGTGTGACAGCAGGAGCTATG 900
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU36190___yw 851 TTACCGGAGAAAAACTCTCCACCGCGGAGCGTGTGACAGCAGGAGCTATG 900
BSNT_05521 901 GCCGCTGCCGGATTCATACCAGTCGTCGGCTGGGCAGGCCGGGCCTTCAA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36190___yw 901 GCCGCTGCCGGATTCATACCAGTCGTCGGCTGGGCAGGCCGGGCCTTCAA 950
BSNT_05521 951 AGGCGGAAAAGCCATCTACAAAACCGGAAAAGCAGCTATCGCGGCTGAAC 1000
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU36190___yw 951 AGGCGGAAAAGCCATCTACAAAACCGGAAAAGCAGCTATCGCTGCTGAAC 1000
BSNT_05521 1001 ACGCTTTAGACGCCTACAAAACAGGCAAATCCTTAGACATTCTCAAAATG 1050
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU36190___yw 1001 ACGCATTAGACGCCTACAAAACAGGCAAATCCTTAGACATTCTCAAAATG 1050
BSNT_05521 1051 ACAGAAATGGGTGCATACGGCCTTGTAGCGTCAAACGGATTCTCAGAAGC 1100
|||||||||||.||||||||||||||.|||||||||||||||||||||||
BSU36190___yw 1051 ACAGAAATGGGCGCATACGGCCTTGTTGCGTCAAACGGATTCTCAGAAGC 1100
BSNT_05521 1101 CGTCACAGGCCGGGATATGTTCGGAAACAAAGTGTCTGAGGAGAAGCGGA 1150
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU36190___yw 1101 TGTCACAGGCCGGGATATGTTCGGAAACAAAGTGTCTGAGGAGAAGCGGA 1150
BSNT_05521 1151 A--AACGGGTGCGCTGGAAGCGGCATTGAGC-----TTGGTTGGAGCCGG 1193
| || ||.||||||||||| .||| .| |||| ||||||.||
BSU36190___yw 1151 AGCAA--GGGGCGCTGGAAGC--TATT--ACTATTATTGG-TGGAGCAGG 1193
BSNT_05521 1194 TGCATTGGCGAAACA-TA--TTGAT--------------AAAGGCATCCC 1226
|||||| ||| || ||||| |||.|| |||.
BSU36190___yw 1194 ---ATTGGC---ACACTACTTTGATCGGTTGTACCAAAAAAATGC-TCCA 1236
BSNT_05521 1227 GCT-----------------TGCAACCC--ATT--CAAAATTCC------ 1249
..| ||.||.|| ||| |||.|||.|
BSU36190___yw 1237 TATGTCAATAAAGTGAGTAATGAAAGCCTTATTAGCAATATTGCTAAGAC 1286
BSNT_05521 1250 --------AAAAAGCAAACAA------AACACT--AGAAAAA-------- 1275
||||| |||||.| ||.|.| |||||.|
BSU36190___yw 1287 TACTGAAGAAAAA-CAAACTAGGCTTCAATATTTAAGAAATAAGCATGGT 1335
BSNT_05521 1276 GTA------AAACAA----TTCAAAGTCCC----AACAAACGTCCGCGTA 1311
||| |||.|| |||| || ||.||| || ||
BSU36190___yw 1336 GTATTGTCTAAAGAAGATCTTCA-----CCATCGAATAAA--TC----TA 1374
BSNT_05521 1312 TACGCAG--------AACGCCC-----AG-----------------TAAC 1331
...|||| ||||..| || ||||
BSU36190___yw 1375 AGGGCAGAAGTACTAAACGAACTTAGTAGAATTAAATCTTCTGGTCTAAC 1424
BSNT_05521 1332 T---------------CCGGAGG--GCT------TT----------ACA- 1347
| ||.|.|| ||| || |||
BSU36190___yw 1425 TAAAAAACAAAGAGGCCCTGCGGTAGCTGGTGTATTGGACAAAAAAACAG 1474
BSNT_05521 1348 -----------TTCGGAATCCCGACAGTACGTGTAGATGTGGAA------ 1380
||.||||| ..|||.|| |||||| ||||
BSU36190___yw 1475 GCAATTATTATTTTGGAAT--AAACAATA----TAGATG-GGAAGCCACC 1517
BSNT_05521 1381 -AAG-----ACGGC----TGTTAAGGATCTTGGGATTGTGAAGATG---- 1416
||| ||..| |.||.|.|| |.|.|||||.||.|||
BSU36190___yw 1518 TAAGGTACTACATCCACTTATTCATGA---TAGAATTGTAAATATGCCTA 1564
BSNT_05521 1417 -----------GTA-GTGAT--------------GGCGG----TCGT--- 1433
|.| ||.|| ||||| ||.|
BSU36190___yw 1565 CAGAACTTAAAGAAGGTTATATAAAGACGTCAGGGGCGGGTTCTCATGCC 1614
BSNT_05521 1434 -AAGGGAA-GCTC----------------TCATAGTCCT----------- 1454
|||..|| |||| |||.||.|||
BSU36190___yw 1615 GAAGTTAATGCTCTAAATGAAGCGTTACTTCAAAGACCTGATGCGGATTT 1664
BSNT_05521 1455 --AACATTT--------------------CTA--AAAATCACGATAA--- 1477
||.|||| ||| |||||.| ||||
BSU36190___yw 1665 AAAAGATTTAATGGTATATGTAGTAAGTGCTAGGAAAATAA--ATAAAAA 1712
BSNT_05521 1478 ------AGTAG--------------------------------------- 1482
||.||
BSU36190___yw 1713 GATGCCAGAAGGTGTCCCAATGCCTAGATGTCCACATTGTGAATATATAA 1762
BSNT_05521 1482 ----------------------------------------------- 1482
BSU36190___yw 1763 CTCAAAATACAAATTATATACCGGAGGCTTTAAAGTATGGAAAATGA 1809
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